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GEO accession:
Sample GSM429074
Query DataSets for GSM429074
Status
Public on Dec 22, 2009
Title
Low Salt Diet project_LSD dog heart sample LSD1
Sample type
RNA
Source name
LSD dog heart
Organism
Canis lupus familiaris
Characteristics
tissue: heart
protocol: low salt diet
gender: male
Extracted molecule
total RNA
Extraction protocol
RNA extracted using Trizol reagents
Label
Biotin
Label protocol
Affymetrix labeling procedure
Hybridization protocol
Affymetrix
Scan protocol
Affymetrix
Description
RNA extracted from the LV of dog hearts
Data processing
GCOS/ExpressionStat 5.0
Submission date
Jul 16, 2009
Last update date
Mar 24, 2010
Contact name
Caroline Ojaimi
E-mail(s)
CAROLINE_OJAIMI@NYMC.EDU
Phone
914-594 4227
Organization name
New York Medical College
Street address
City
Valhalla
State/province
NY
ZIP/Postal code
10595
Country
USA
Platform ID
GPL3738
Series (1)
GSE17149
Potential mechanisms of low salt diet induced cardiac diseases
Data table header descriptions
ID_REF
VALUE
Signal
ABS_CALL
pixel
DETECTION P-VALUE
P value
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
1688.66
P
4.42873e-05
AFFX-BioB-M_at
2843.38
P
4.42873e-05
AFFX-BioB-3_at
2127.11
P
4.42873e-05
AFFX-BioC-5_at
4206.72
P
4.42873e-05
AFFX-BioC-3_at
2892.04
P
4.42873e-05
AFFX-BioDn-5_at
7060.89
P
4.42873e-05
AFFX-BioDn-3_at
13353.7
P
4.42873e-05
AFFX-CreX-5_at
24540.8
P
0.0044838
AFFX-CreX-3_at
26742.3
P
9.82184e-05
AFFX-DapX-5_at
10.0188
A
0.455409
AFFX-DapX-M_at
1.20001
A
0.993813
AFFX-DapX-3_at
1.45703
A
0.993817
AFFX-LysX-5_at
0.93591
A
0.898052
AFFX-LysX-M_at
2.92073
A
0.724924
AFFX-LysX-3_at
0.526279
A
0.998204
AFFX-PheX-5_at
7.46682
A
0.699394
AFFX-PheX-M_at
1.27275
A
0.883887
AFFX-PheX-3_at
3.73721
A
0.559364
AFFX-ThrX-5_at
0.583817
A
0.963431
AFFX-ThrX-M_at
0.695312
A
0.904352
Total number of rows:
43035
Table truncated, full table size
1681 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM429074.CEL.gz
2.9 Mb
(ftp)
(http)
CEL
GSM429074.CHP.gz
246.2 Kb
(ftp)
(http)
CHP
Processed data included within Sample table
Processed data provided as supplementary file
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