|
| Status |
Public on Aug 23, 2020 |
| Title |
5073-9 |
| Sample type |
genomic |
| |
|
| Source name |
normal blood sample
|
| Organism |
Pan troglodytes |
| Characteristics |
Sex: Female
age: 8.86
tissue: blood
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
silica colum
|
| Label |
Cy5 and Cy3
|
| Label protocol |
Standard Illumina Protocol
|
| |
|
| Hybridization protocol |
bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation EPIC Beadchip using standard Illumina protocol
|
| Scan protocol |
samples were scanned using an Illumina BeadArrayTM reader
|
| Data processing |
.idat files were quality filtered and converted to beta values using the Chimp Analysis Methylation Pipeline R package
beta values
|
| |
|
| Submission date |
Aug 24, 2019 |
| Last update date |
Aug 24, 2020 |
| Contact name |
Elaine Guevara |
| E-mail(s) |
elaineeguevara@gmail.com
|
| Phone |
206-303-8258
|
| Organization name |
Duke University
|
| Department |
Evolutionary Anthropology
|
| Street address |
130 Science Drive
|
| City |
Durham |
| State/province |
North Carolina |
| ZIP/Postal code |
27708 |
| Country |
USA |
| |
|
| Platform ID |
GPL21145 |
| Series (1) |
| GSE136296 |
Age-Associated Epigenetic Change in Chimpanzees and Humans |
|
