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Sample GSM395723 Query DataSets for GSM395723
Status Public on May 21, 2010
Title SNU76
Sample type RNA
Source name combined hepatocellular carcinoma and cholangiocarcinoma
Organism Homo sapiens
Characteristics tissue: combined hepatocellular carcinoma and cholangiocarcinoma
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label biotin
Label protocol 5 ug of total RNA from the HCC tissues was used for labeling according to standard protocols recommended by Affymetrix, Inc
Hybridization protocol Hybridization and detection were performed with Affymetrix Human Genome U133A 2.0 chips according to standard protocols.
Scan protocol GeneChips were scanned GeneChip scanner 3000 using GCOS software
Description Gene expression data from hepatocellular carcinoma
Data processing The data were analyzed with RMA normalization method.
Submission date Apr 21, 2009
Last update date Apr 13, 2010
Contact name Hyun Goo Woo
Organization name Ajou University School of Medicine
Street address 164 Worldcup-ro, Yeongtong-gu
City Suwon
ZIP/Postal code 443-721
Country South Korea
Platform ID GPL571
Series (1)
GSE15765 Identification of cholangiocarcinoma-like gene expression traits in hepatocellular carcinoma

Data table header descriptions

Data table
1007_s_at 9.868285315
1053_at 7.20637317
117_at 5.779853391
121_at 6.877092335
1255_g_at 2.483459194
1294_at 6.409137555
1316_at 4.517071816
1320_at 3.594797041
1405_i_at 3.778282732
1431_at 3.124094026
1438_at 4.702450063
1487_at 7.7859035
1494_f_at 5.134056222
1598_g_at 7.187311723
160020_at 6.898992584
1729_at 7.628169476
1773_at 5.235547836
177_at 5.807193436
179_at 7.15740268
1861_at 7.227004328

Total number of rows: 22277

Table truncated, full table size 496 Kbytes.

Supplementary file Size Download File type/resource
GSM395723.CEL.gz 1.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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