|
Status |
Public on Mar 22, 2020 |
Title |
CC131_eCCA |
Sample type |
RNA |
|
|
Source name |
extrahepatic cholangiocarcinoma
|
Organism |
Homo sapiens |
Characteristics |
tissue: extrahepatic cholangiocarcinoma center: JH
|
Treatment protocol |
Not applicable. Archived tissue was obtained at our Insitution upon patient's consent
|
Growth protocol |
Samples collected after surgical resection and FFPE
|
Extracted molecule |
total RNA |
Extraction protocol |
Trizol extraction of total RNA was performed according to the manufacturer's instructions
|
Label |
Biotin
|
Label protocol |
Biotinylated cRNA were prepared according to the standard Affymetrix protocol
|
|
|
Hybridization protocol |
Standard Affymetrix protocol
|
Scan protocol |
Standard Affymetrix protocol
|
Data processing |
The data were analyzed with GenePattern (Broad Institute) using Expression file creator module and the RMA algorithm.
|
|
|
Submission date |
Jun 06, 2019 |
Last update date |
Mar 22, 2020 |
Contact name |
Robert Montal |
E-mail(s) |
montalrobert@gmail.com
|
Organization name |
IDIBAPS
|
Street address |
Rosselló 153
|
City |
Barcelona |
ZIP/Postal code |
08036 |
Country |
Spain |
|
|
Platform ID |
GPL13667 |
Series (1) |
GSE132305 |
Molecular classification and therapeutic targets in extrahepatic cholangiocarcinoma |
|