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Sample GSM38060 Query DataSets for GSM38060
Status Public on Jan 15, 2005
Title Lung - 2483
Sample type RNA
 
Source name Bronchus & Lung
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.4
Patient Age: 70-80
Gender: Female
Ethnic Background: Caucasian
Tobacco Use : Yes
Years of Tobacco Use: 16-20
Type of Tobacco Use: Cigarettes
Alcohol Consumption?: No
Family History of Cancer?: Yes
Days from Patient Diagnosis to Excision: 68
Presenting Symptoms: SOB
Workplace or household smokers?: No
Pathological T: 1
Pathological N: 0
Pathological M: 0
Pathological Stage: 1A
Pathological Grade: 3
Primary Site: Lung
Histology: Adenocarcinoma, NOS
 
Submission date Dec 23, 2004
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE60486
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 509.5 P 0.000662
AFFX-BioB-M_at 827.6 P 0.000052
AFFX-BioB-3_at 332.4 P 0.000081
AFFX-BioC-5_at 1797 P 0.000052
AFFX-BioC-3_at 2310.6 P 0.000044
AFFX-BioDn-5_at 4257.9 P 0.000052
AFFX-BioDn-3_at 8005.3 P 0.000052
AFFX-CreX-5_at 18313.8 P 0.000052
AFFX-CreX-3_at 26023.1 P 0.000044
AFFX-DapX-5_at 965 P 0.000044
AFFX-DapX-M_at 1975.4 P 0.000509
AFFX-DapX-3_at 3010.1 P 0.000052
AFFX-LysX-5_at 146.1 P 0.000169
AFFX-LysX-M_at 197.3 P 0.00844
AFFX-LysX-3_at 365.2 P 0.000147
AFFX-PheX-5_at 138.2 P 0.000147
AFFX-PheX-M_at 273.5 P 0.000127
AFFX-PheX-3_at 321.4 P 0.000754
AFFX-ThrX-5_at 331.7 P 0.001593
AFFX-ThrX-M_at 475.9 P 0.000052

Total number of rows: 54675

Table truncated, full table size 1447 Kbytes.




Supplementary file Size Download File type/resource
GSM38060.CEL.gz 8.2 Mb (ftp)(http) CEL
Processed data included within Sample table

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