|
| Status |
Public on Sep 09, 2010 |
| Title |
patient_sample_CL20041116119AA |
| Sample type |
RNA |
| |
|
| Source name |
primary lung cancer
|
| Organism |
Homo sapiens |
| Characteristics |
tissue: primary lung cancer
Post Surgical Treatment: ACT
Stage: II
age: 58.2
Sex: Male
Cause of death: Alive
Histology type: ADC
OS time: 7.20
OS status: Alive
DSS time: 7.20
DSS status: Alive
predominant subtype: Acinar
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Total RNA was isolated from frozen tumors by homogenization in guanidium isothiocyanate solution and acid phenol-chloroform extraction
|
| Label |
biotin
|
| Label protocol |
As described in Shedden K et al. 2008.
|
| |
|
| Hybridization protocol |
standard Affymetrix procedures
|
| Scan protocol |
standard Affymetrix procedures
|
| Description |
patient_sample_CL20041116119AA
|
| Data processing |
Raw data were pre-processed using RMAexpress v0.3 (Bolstad BM, 2003).
|
| |
|
| Submission date |
Feb 12, 2009 |
| Last update date |
Dec 29, 2014 |
| Contact name |
Ming Tsao |
| E-mail(s) |
ming.tsao@uhn.on.ca
|
| Phone |
4169464501
|
| Organization name |
University of Toronto
|
| Department |
Ontario Cancer Institute
|
| Lab |
Applied Molecular Oncology
|
| Street address |
610 University Avenue
|
| City |
Toronto |
| State/province |
Ontario |
| ZIP/Postal code |
M5G2M9 |
| Country |
Canada |
| |
|
| Platform ID |
GPL96 |
| Series (1) |
| GSE14814 |
Prognostic and Predictive Gene Signature for Adjuvant Chemotherapy in Resected Non-Small-Cell Lung Cancer |
|
| Relations |
| Reanalyzed by |
GSE60486 |
