|
| Status |
Public on May 18, 2010 |
| Title |
VCaP cells treated with R1881, dye swap |
| Sample type |
RNA |
| |
|
| Channel 1 |
| Source name |
ethanol treated cells
|
| Organism |
Homo sapiens |
| Characteristics |
VCaP cells
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Total RNA extracted using Trizol following manufacturer's instructions
|
| Label |
Cy5
|
| Label protocol |
Agilent labeling protocol
|
| |
|
| Channel 2 |
| Source name |
cells treated with R1881
|
| Organism |
Homo sapiens |
| Characteristics |
VCaP cells
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Total RNA extracted using Trizol following manufacturer's instructions
|
| Label |
Cy3
|
| Label protocol |
Agilent labeling protocol
|
| |
|
| |
| Hybridization protocol |
Agilent hyb protocol
|
| Scan protocol |
Agilent scanner
Images were quantified using Genepix6.0
|
| Description |
analysis of ERG overexpression and androgen effect in VCaP cells
R1881 (dye swap)
|
| Data processing |
Feature Extraction, Agilent
|
| |
|
| Submission date |
Dec 17, 2008 |
| Last update date |
May 18, 2010 |
| Contact name |
Jindan Yu |
| E-mail(s) |
jindan-yu@northwestern.edu
|
| Organization name |
Northwestern University
|
| Department |
Medicine - Hem/Onc
|
| Lab |
Yu
|
| Street address |
303 E. Superior St.
|
| City |
Chicago |
| State/province |
IL |
| ZIP/Postal code |
60611 |
| Country |
USA |
| |
|
| Platform ID |
GPL4133 |
| Series (2) |
| GSE14028 |
An Integrated Network of Androgen Receptor and TMPRSS2-ERG Gene Fusion in Prostate Cancer Progression (I) |
| GSE14097 |
An Integrated Network of Androgen Receptor and TMPRSS2-ERG Gene Fusion in Prostate Cancer Progression |
|
