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Sample GSM341715 Query DataSets for GSM341715
Status Public on Jan 05, 2009
Title 9416 TAF-tib42 rep3
Sample type RNA
 
Channel 1
Source name 10335_resistant
Organism Mus musculus
Characteristics 9416_Tumor_associated_fibroblasts-tib42.rep3
Extracted molecule total RNA
Extraction protocol GE2-SSPE_95_Feb07 with FE version 9.5
Label Cy5
Label protocol Agilent's Low input RNA Linear Amp kit
 
Channel 2
Source name Universal Mouse Reference RNA: Stratagene Catalog #740100
Organism Mus musculus
Characteristics Universal Mouse Reference RNA: Stratagene Catalog #740100
Extracted molecule total RNA
Extraction protocol GE2-SSPE_95_Feb07 with FE version 9.5
Label Cy3
Label protocol Agilent's Low input RNA Linear Amp kit
 
 
Hybridization protocol Agilent's In situ Hybridization kit
Scan protocol Agilent DNA microarray scanner
Description none
Data processing Rosetta Resolver Feature Extraction Version 8.5.1.1
 
Submission date Nov 13, 2008
Last update date Jan 05, 2009
Contact name Josh Kaminker
Organization name Genentech
Department Bioinformatics and Computational Biology
Street address 1 DNA Way
City South San Francisco
State/province CA
ZIP/Postal code 94080
Country USA
 
Platform ID GPL7042
Series (1)
GSE13549 Fibroblasts associated with tumors refractory to anti-VEGF treatment

Data table header descriptions
ID_REF
VALUE log2 of PRE_VALUE: Linear&LOWESS normalized test/reference
PRE_VALUE Linear&LOWESS normalized test/reference (non logged data)

Data table
ID_REF VALUE PRE_VALUE
A_51_P195244 -0.1418 0.9064085483551
A_51_P397375 -0.2797 0.8237681388855
A_52_P221804 -0.7769 0.58362782001495
A_52_P155692 0.0482 1.0339463949204
A_51_P293015 0.2445 1.1846716403961
A_52_P348648 -0.0608 0.95873153209686
A_51_P183723 0.2077 1.1548644304275
A_51_P446510 0.9729 1.9628359079361
A_51_P520397 0.1412 1.1028208732605
A_51_P325217 -0.6992 0.61592096090317
A_51_P493037 -0.3041 0.80995333194733
A_52_P109232 -0.0477 0.96745997667313
A_51_P379873 0.0120 1.0083608627319
A_52_P235102 -0.7342 0.60116958618164
A_51_P279712 0.7691 1.7041860818863
A_52_P564046 0.0975 1.0699388980866
A_51_P258098 -2.1254 0.22919228672981
A_52_P573543 -0.2470 0.84262043237686
A_52_P339054 -0.3088 0.80730193853378
A_52_P514306 0.2353 1.1771721839905

Total number of rows: 41067

Table truncated, full table size 1460 Kbytes.




Supplementary file Size Download File type/resource
GSM341715.txt.gz 12.4 Mb (ftp)(http) TXT
Processed data included within Sample table

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