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|
| Status |
Public on Feb 02, 2009 |
| Title |
Medulloblastoma tumor MB89 |
| Sample type |
RNA |
| |
|
| Source name |
Medulloblastoma tumor
|
| Organism |
Homo sapiens |
| Characteristics |
Patient age at diagnosis: 134 months. Histological subtype: classic. CTNNB1 mutation: no.
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Total RNAs were isolated using the Trizol Reagent
|
| Label |
Biotin
|
| Label protocol |
According to Affymetrix Gene-Chip expression analysis technical manual, Affymetrix, Santa Clara, California.
|
| |
|
| Hybridization protocol |
According to Affymetrix Gene-Chip expression analysis technical manual, Affymetrix, Santa Clara, California.
|
| Scan protocol |
According to Affymetrix Gene-Chip expression analysis technical manual, Affymetrix, Santa Clara, California.
|
| Description |
MB89
|
| Data processing |
GC-RMA normalization
|
| |
|
| Submission date |
Sep 24, 2008 |
| Last update date |
Jan 08, 2019 |
| Contact name |
Olivier Delattre |
| E-mail(s) |
olivier.delattre@curie.fr
|
| Phone |
33142346681
|
| Fax |
33142646630
|
| Organization name |
Institut Curie
|
| Department |
Genetics
|
| Lab |
U830
|
| Street address |
26 rue d'Ulm
|
| City |
Paris |
| ZIP/Postal code |
75248 cedex 05 |
| Country |
France |
| |
|
| Platform ID |
GPL570 |
| Series (1) |
| GSE12992 |
Beta-catenin status in pediatric medulloblastomas |
|
| Relations |
| Reanalyzed by |
GSE119087 |
| Reanalyzed by |
GSE124814 |
| Data table header descriptions |
| ID_REF |
|
| VALUE |
GC-RMA normalized signal |
| Data table |
| ID_REF |
VALUE |
| 1007_s_at |
8.38 |
| 1053_at |
7.3 |
| 117_at |
2.78 |
| 121_at |
2.28 |
| 1255_g_at |
2.17 |
| 1294_at |
2.69 |
| 1316_at |
3.57 |
| 1320_at |
2.72 |
| 1405_i_at |
3 |
| 1431_at |
2.58 |
| 1438_at |
2.38 |
| 1487_at |
4.01 |
| 1494_f_at |
2.24 |
| 1552256_a_at |
5.61 |
| 1552257_a_at |
6.84 |
| 1552258_at |
2.36 |
| 1552261_at |
2.43 |
| 1552263_at |
2.67 |
| 1552264_a_at |
7.29 |
| 1552266_at |
2.62 |
Total number of rows: 54613
Table truncated, full table size 839 Kbytes.
| Supplementary file |
Size |
Download |
File type/resource |
| GSM324068.CEL.gz |
7.6 Mb |
(ftp)(http) |
CEL |
| Processed data included within Sample table |
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