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Sample GSM2990621 Query DataSets for GSM2990621
Status Public on Feb 10, 2018
Title Health Children rep2
Sample type RNA
 
Source name Health Children
Organism Homo sapiens
Characteristics disease: healthy
tissue: Peripheral blood
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label total RNA
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA
 
Hybridization protocol Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Transcriptome Array 2.0 were washed and stained in the Affymetrix Fluidics Station 450.
Scan protocol GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G3000 7G.
Description Gene expression data from Health Children
Data processing The data were analyzed with RMA using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100
 
Submission date Feb 09, 2018
Last update date Feb 10, 2018
Contact name shipeng Li
E-mail(s) shipengli6@163.com
Phone 13311046526
Organization name Beijing children's hospital
Street address Nan Li Shi Road No. 56,Beijing
City beijng
ZIP/Postal code 100045
Country China
 
Platform ID GPL23126
Series (1)
GSE110396 Expression Profile of Noncoding RNAs and mRNA in Children with Systemic Lupus Erythematosus

Data table header descriptions
ID_REF
VALUE Values presented are log2 RMA signal intensity.

Data table
ID_REF VALUE
AFFX-BkGr-GC03_st 5.019233
AFFX-BkGr-GC04_st 5.997976
AFFX-BkGr-GC05_st 5.336965
AFFX-BkGr-GC06_st 4.985178
AFFX-BkGr-GC07_st 4.578454
AFFX-BkGr-GC08_st 4.090122
AFFX-BkGr-GC09_st 3.769447
AFFX-BkGr-GC10_st 3.506323
AFFX-BkGr-GC11_st 3.266428
AFFX-BkGr-GC12_st 3.134616
AFFX-BkGr-GC13_st 2.923257
AFFX-BkGr-GC14_st 2.77768
AFFX-BkGr-GC15_st 2.592543
AFFX-BkGr-GC16_st 2.630121
AFFX-BkGr-GC17_st 2.536172
AFFX-BkGr-GC18_st 2.615186
AFFX-BkGr-GC19_st 2.757468
AFFX-BkGr-GC20_st 2.701718
AFFX-BkGr-GC21_st 2.745464
AFFX-BkGr-GC22_st 2.990494

Total number of rows: 138745

Table truncated, full table size 3668 Kbytes.




Supplementary file Size Download File type/resource
GSM2990621_D2_Clariom_D_Human_.CEL.gz 19.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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