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Sample GSM291524 Query DataSets for GSM291524
Status Public on Jul 01, 2008
Title Day2 BM45 #3
Sample type RNA
 
Source name Day2 BM34
Organism Saccharomyces cerevisiae
Characteristics strain: BM45
replicate: 3
time: Day 2 of fermentation
Extracted molecule total RNA
Extraction protocol Hot-phenol method
Label Biotin
Label protocol Standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description N/A
Data processing Standard Affymetrix Procedure, MAS5.0
 
Submission date May 28, 2008
Last update date Aug 04, 2010
Contact name Debra Rossouw
E-mail(s) debra@sun.ac.za
Organization name University of Stellenbosch
Department Institute for Wine Biotechnology
Lab Yeast
Street address Cnr Neethling and Victoria rd
City Stellenbosch
State/province Western Cape
ZIP/Postal code 7600
Country South Africa
 
Platform ID GPL2529
Series (1)
GSE11651 Transcriptomic profiling of five industrial wine yeast strains at three time points during allcoholic fermentation

Data table header descriptions
ID_REF
VALUE Intensity of gene expression
ABS_CALL Gene present or absent call
DETECTION P-VALUE p-value for detection

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 200.853 P 5.16732e-05
AFFX-BioB-M_at 300.08 P 5.16732e-05
AFFX-BioB-3_at 214.164 P 4.42873e-05
AFFX-BioC-5_at 432.906 P 4.42873e-05
AFFX-BioC-3_at 544.169 P 4.42873e-05
AFFX-BioDn-5_at 1056.22 P 4.42873e-05
AFFX-BioDn-3_at 2861.24 P 4.42873e-05
AFFX-CreX-5_at 6076.59 P 4.42873e-05
AFFX-CreX-3_at 6127.67 P 4.42873e-05
AFFX-DapX-5_at 219.906 P 4.42873e-05
AFFX-DapX-M_at 547.286 P 5.16732e-05
AFFX-DapX-3_at 875.849 P 4.42873e-05
AFFX-LysX-5_at 40.4439 P 0.000146581
AFFX-LysX-M_at 57.2318 P 0.000389797
AFFX-LysX-3_at 142.831 P 5.16732e-05
AFFX-PheX-5_at 32.7644 P 0.000146581
AFFX-PheX-M_at 70.5002 P 5.16732e-05
AFFX-PheX-3_at 109.77 P 7.00668e-05
AFFX-ThrX-5_at 32.1087 P 0.000224668
AFFX-ThrX-M_at 74.9913 P 4.42873e-05

Total number of rows: 10928

Table truncated, full table size 338 Kbytes.




Supplementary file Size Download File type/resource
GSM291524.CEL.gz 1023.7 Kb (ftp)(http) CEL
GSM291524.CHP.gz 57.2 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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