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Sample GSM291523 Query DataSets for GSM291523
Status Public on Jul 01, 2008
Title Day2 BM45 #2
Sample type RNA
 
Source name Day2 BM45
Organism Saccharomyces cerevisiae
Characteristics strain: BM45
replicate: 2
time: Day 2 of fermentation
Extracted molecule total RNA
Extraction protocol Hot-phenol method
Label Biotin
Label protocol Standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description N/A
Data processing Standard Affymetrix Procedure, MAS5.0
 
Submission date May 28, 2008
Last update date Aug 04, 2010
Contact name Debra Rossouw
E-mail(s) debra@sun.ac.za
Organization name University of Stellenbosch
Department Institute for Wine Biotechnology
Lab Yeast
Street address Cnr Neethling and Victoria rd
City Stellenbosch
State/province Western Cape
ZIP/Postal code 7600
Country South Africa
 
Platform ID GPL2529
Series (1)
GSE11651 Transcriptomic profiling of five industrial wine yeast strains at three time points during allcoholic fermentation

Data table header descriptions
ID_REF
VALUE Intensity of gene expression
ABS_CALL Gene present or absent call
DETECTION P-VALUE p-value for detection

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 184.668 P 6.02111e-05
AFFX-BioB-M_at 241.309 P 4.42873e-05
AFFX-BioB-3_at 164.096 P 5.16732e-05
AFFX-BioC-5_at 339.715 P 5.16732e-05
AFFX-BioC-3_at 460.951 P 4.42873e-05
AFFX-BioDn-5_at 892.563 P 4.42873e-05
AFFX-BioDn-3_at 2659.75 P 4.42873e-05
AFFX-CreX-5_at 5453.49 P 5.16732e-05
AFFX-CreX-3_at 6012.87 P 4.42873e-05
AFFX-DapX-5_at 263.472 P 4.42873e-05
AFFX-DapX-M_at 678.678 P 5.16732e-05
AFFX-DapX-3_at 1083.93 P 4.42873e-05
AFFX-LysX-5_at 42.2072 P 0.000146581
AFFX-LysX-M_at 54.9291 P 0.000509415
AFFX-LysX-3_at 210.349 P 4.42873e-05
AFFX-PheX-5_at 42.3484 P 0.00010954
AFFX-PheX-M_at 78.5997 P 5.16732e-05
AFFX-PheX-3_at 131.794 P 4.42873e-05
AFFX-ThrX-5_at 39.2994 P 0.000581214
AFFX-ThrX-M_at 87.5868 P 5.16732e-05

Total number of rows: 10928

Table truncated, full table size 338 Kbytes.




Supplementary file Size Download File type/resource
GSM291523.CEL.gz 1007.8 Kb (ftp)(http) CEL
GSM291523.CHP.gz 57.1 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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