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Sample GSM290999 Query DataSets for GSM290999
Status Public on Jul 01, 2008
Title Day14 EC1118 #3
Sample type RNA
 
Source name Day14 EC1118
Organism Saccharomyces cerevisiae
Characteristics strain: EC1118
replicate: 3
time: Day 14 of fermentation
Extracted molecule total RNA
Extraction protocol Hot Phenol Method
Label Biotin
Label protocol Standard Affymetrix Procedure
 
Hybridization protocol Standard Affymetrix Procedure
Scan protocol Standard Affymetrix Procedure
Description N/A
Data processing Standard Affymetrix Procedure, MAS5.0
 
Submission date May 24, 2008
Last update date Aug 04, 2010
Contact name Debra Rossouw
E-mail(s) debra@sun.ac.za
Organization name University of Stellenbosch
Department Institute for Wine Biotechnology
Lab Yeast
Street address Cnr Neethling and Victoria rd
City Stellenbosch
State/province Western Cape
ZIP/Postal code 7600
Country South Africa
 
Platform ID GPL2529
Series (1)
GSE11651 Transcriptomic profiling of five industrial wine yeast strains at three time points during allcoholic fermentation

Data table header descriptions
ID_REF
VALUE Signal
ABS_CALL indicating whether the transcript was present (P), absent (A), or marginal (M)
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 347.659 P 6.02111e-05
AFFX-BioB-M_at 436.789 P 4.42873e-05
AFFX-BioB-3_at 300.19 P 5.16732e-05
AFFX-BioC-5_at 631.75 P 4.42873e-05
AFFX-BioC-3_at 890.016 P 4.42873e-05
AFFX-BioDn-5_at 2303.95 P 4.42873e-05
AFFX-BioDn-3_at 4102.56 P 4.42873e-05
AFFX-CreX-5_at 12413.9 P 5.16732e-05
AFFX-CreX-3_at 11784.2 P 4.42873e-05
AFFX-DapX-5_at 555.766 P 4.42873e-05
AFFX-DapX-M_at 1355.55 P 5.16732e-05
AFFX-DapX-3_at 2206.26 P 4.42873e-05
AFFX-LysX-5_at 76.8903 P 4.42246e-05
AFFX-LysX-M_at 115.525 P 5.16732e-05
AFFX-LysX-3_at 329.023 P 4.42873e-05
AFFX-PheX-5_at 116.693 P 7.00668e-05
AFFX-PheX-M_at 203.032 P 9.4506e-05
AFFX-PheX-3_at 222.644 P 4.42873e-05
AFFX-ThrX-5_at 98.4244 P 8.14279e-05
AFFX-ThrX-M_at 218.077 P 4.42873e-05

Total number of rows: 10928

Table truncated, full table size 337 Kbytes.




Supplementary file Size Download File type/resource
GSM290999.CEL.gz 933.3 Kb (ftp)(http) CEL
GSM290999.CHP.gz 57.5 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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