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Sample GSM290995 Query DataSets for GSM290995
Status Public on Jul 01, 2008
Title Day14 DV10 #2
Sample type RNA
 
Source name Day14 DV10
Organism Saccharomyces cerevisiae
Characteristics strain: DV10
replicate: 2
time: Day 14 of fermentation
Extracted molecule total RNA
Extraction protocol Hot Phenol Method
Label Biotin
Label protocol Standard Affymetrix Procedure
 
Hybridization protocol Standard Affymetrix Procedure
Scan protocol Standard Affymetrix Procedure
Description N/A
Data processing Standard Affymetrix Procedure, MAS5.0
 
Submission date May 24, 2008
Last update date Aug 04, 2010
Contact name Debra Rossouw
E-mail(s) debra@sun.ac.za
Organization name University of Stellenbosch
Department Institute for Wine Biotechnology
Lab Yeast
Street address Cnr Neethling and Victoria rd
City Stellenbosch
State/province Western Cape
ZIP/Postal code 7600
Country South Africa
 
Platform ID GPL2529
Series (1)
GSE11651 Transcriptomic profiling of five industrial wine yeast strains at three time points during allcoholic fermentation

Data table header descriptions
ID_REF
VALUE Relative intensity of gene expression
ABS_CALL gene present or absent call
DETECTION P-VALUE p value for detection of gene

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 476.159 P 4.42873e-05
AFFX-BioB-M_at 751.306 P 4.42873e-05
AFFX-BioB-3_at 441.175 P 4.42873e-05
AFFX-BioC-5_at 1024.73 P 4.42873e-05
AFFX-BioC-3_at 1232.77 P 4.42873e-05
AFFX-BioDn-5_at 2734.71 P 4.42873e-05
AFFX-BioDn-3_at 5403.24 P 4.42873e-05
AFFX-CreX-5_at 15515.8 P 5.16732e-05
AFFX-CreX-3_at 14570.3 P 4.42873e-05
AFFX-DapX-5_at 1089.68 P 4.42873e-05
AFFX-DapX-M_at 2864.22 P 4.42873e-05
AFFX-DapX-3_at 4889.06 P 4.42873e-05
AFFX-LysX-5_at 135.93 P 4.42873e-05
AFFX-LysX-M_at 340.592 P 5.16732e-05
AFFX-LysX-3_at 834.182 P 4.42873e-05
AFFX-PheX-5_at 226.832 P 4.42873e-05
AFFX-PheX-M_at 335.446 P 4.42873e-05
AFFX-PheX-3_at 485.087 P 4.42873e-05
AFFX-ThrX-5_at 170.513 P 7.00668e-05
AFFX-ThrX-M_at 380.544 P 4.42873e-05

Total number of rows: 10928

Table truncated, full table size 337 Kbytes.




Supplementary file Size Download File type/resource
GSM290995.CEL.gz 901.8 Kb (ftp)(http) CEL
GSM290995.CHP.gz 58.3 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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