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Sample GSM290992 Query DataSets for GSM290992
Status Public on Jul 01, 2008
Title Day14 BM45 #1
Sample type RNA
 
Source name Day14 BM45
Organism Saccharomyces cerevisiae
Characteristics strain: BM45
replicate: 1
time: Day 14 of fermentation
Extracted molecule total RNA
Extraction protocol Hot Phenol Method
Label Biotin
Label protocol Standard Affymetrix Procedure
 
Hybridization protocol Standard Affymetrix Procedure
Scan protocol Standard Affymetrix Procedure
Description N/A
Data processing Standard Affymetrix Procedure, MAS5.0
 
Submission date May 24, 2008
Last update date Aug 04, 2010
Contact name Debra Rossouw
E-mail(s) debra@sun.ac.za
Organization name University of Stellenbosch
Department Institute for Wine Biotechnology
Lab Yeast
Street address Cnr Neethling and Victoria rd
City Stellenbosch
State/province Western Cape
ZIP/Postal code 7600
Country South Africa
 
Platform ID GPL2529
Series (1)
GSE11651 Transcriptomic profiling of five industrial wine yeast strains at three time points during allcoholic fermentation

Data table header descriptions
ID_REF
VALUE Signal
ABS_CALL indicating whether the transcript was present (P), absent (A), or marginal (M)
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 320.341 P 4.42873e-05
AFFX-BioB-M_at 411.262 P 4.42873e-05
AFFX-BioB-3_at 299.561 P 5.16732e-05
AFFX-BioC-5_at 643.191 P 4.42873e-05
AFFX-BioC-3_at 959.056 P 4.42873e-05
AFFX-BioDn-5_at 2092.64 P 4.42873e-05
AFFX-BioDn-3_at 4305.76 P 4.42873e-05
AFFX-CreX-5_at 13281.6 P 5.16732e-05
AFFX-CreX-3_at 12462 P 4.42873e-05
AFFX-DapX-5_at 1734.76 P 4.42873e-05
AFFX-DapX-M_at 3817.14 P 4.42873e-05
AFFX-DapX-3_at 5744.91 P 4.42873e-05
AFFX-LysX-5_at 216.43 P 4.42873e-05
AFFX-LysX-M_at 353.265 P 4.42873e-05
AFFX-LysX-3_at 1103.52 P 4.42873e-05
AFFX-PheX-5_at 392.621 P 4.42873e-05
AFFX-PheX-M_at 668.215 P 4.42873e-05
AFFX-PheX-3_at 785.491 P 4.42873e-05
AFFX-ThrX-5_at 381.453 P 4.42873e-05
AFFX-ThrX-M_at 647.72 P 4.42873e-05

Total number of rows: 10928

Table truncated, full table size 337 Kbytes.




Supplementary file Size Download File type/resource
GSM290992.CEL.gz 904.8 Kb (ftp)(http) CEL
GSM290992.CHP.gz 58.0 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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