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Sample GSM290991 Query DataSets for GSM290991
Status Public on Jul 01, 2008
Title Day2 DV10 #3
Sample type RNA
 
Source name Day2 DV10
Organism Saccharomyces cerevisiae
Characteristics strain: DV10
replicate: 3
time: Day 2 of fermentation
Extracted molecule total RNA
Extraction protocol Hot Phenol Method
Label Biotin
Label protocol Standard Affymetrix Procedure
 
Hybridization protocol Standard Affymetrix Procedure
Scan protocol Standard Affymetrix Procedure
Description N/A
Data processing Standard Affymetrix Procedure, MAS5.0
 
Submission date May 24, 2008
Last update date Aug 04, 2010
Contact name Debra Rossouw
E-mail(s) debra@sun.ac.za
Organization name University of Stellenbosch
Department Institute for Wine Biotechnology
Lab Yeast
Street address Cnr Neethling and Victoria rd
City Stellenbosch
State/province Western Cape
ZIP/Postal code 7600
Country South Africa
 
Platform ID GPL2529
Series (1)
GSE11651 Transcriptomic profiling of five industrial wine yeast strains at three time points during allcoholic fermentation

Data table header descriptions
ID_REF
VALUE Signal
ABS_CALL indicating whether the transcript was present (P), absent (A), or marginal (M)
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 230.472 P 5.16732e-05
AFFX-BioB-M_at 335.259 P 4.42873e-05
AFFX-BioB-3_at 219.679 P 4.42873e-05
AFFX-BioC-5_at 512.628 P 4.42873e-05
AFFX-BioC-3_at 680.035 P 4.42873e-05
AFFX-BioDn-5_at 1546.58 P 4.42873e-05
AFFX-BioDn-3_at 3058.41 P 4.42873e-05
AFFX-CreX-5_at 7708.79 P 5.16732e-05
AFFX-CreX-3_at 7822.14 P 4.42873e-05
AFFX-DapX-5_at 243.699 P 4.42873e-05
AFFX-DapX-M_at 576.43 P 5.16732e-05
AFFX-DapX-3_at 1172.59 P 4.42873e-05
AFFX-LysX-5_at 50.7117 P 0.000169227
AFFX-LysX-M_at 75.5724 P 0.000296708
AFFX-LysX-3_at 236.85 P 5.16732e-05
AFFX-PheX-5_at 54.2501 P 6.01289e-05
AFFX-PheX-M_at 88.2242 P 5.16732e-05
AFFX-PheX-3_at 130.307 P 4.42873e-05
AFFX-ThrX-5_at 35.9661 P 0.000856509
AFFX-ThrX-M_at 96.2982 P 4.42873e-05

Total number of rows: 10928

Table truncated, full table size 338 Kbytes.




Supplementary file Size Download File type/resource
GSM290991.CEL.gz 991.5 Kb (ftp)(http) CEL
GSM290991.CHP.gz 57.3 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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