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GEO accession:
Sample GSM280362
Query DataSets for GSM280362
Status
Public on Apr 03, 2009
Title
Post Ctrl 3
Sample type
RNA
Source name
Post Vaccination Control Non Vaccinated tumor
Organism
Homo sapiens
Characteristics
Post Vaccination Control Non Vaccinated tumor
Extracted molecule
total RNA
Extraction protocol
Trizol extraction of total RNA was performed according to the Qiagen kit instructions.
Label
biotin
Label protocol
Standard Affymetrix
Hybridization protocol
Standard Affymetrix
Scan protocol
Standard Affymetrix
Description
RNA from frozen Glioblastoma Multiforme tumor
Data processing
MAS5 Normalized
Submission date
Apr 08, 2008
Last update date
Aug 28, 2018
Contact name
Gretchen Duvall
Organization name
Cedars Sinai Medical Center
Street address
8700 Beverly BLVD
City
Los Angeles
State/province
CA
ZIP/Postal code
90048
Country
USA
Platform ID
GPL570
Series (1)
GSE11100
Dendritic Cell Vaccine against Glioblastoma Multiforme Patients
Relations
Reanalyzed by
GSE119087
Data table header descriptions
ID_REF
VALUE
MAS5 calculated Signal intensity
ABS_CALL
The call in an absolute analysis that indicates if the transcript was Present P- Absent A- Marginal M- or No Call NC
DETECTION P-VALUE
p-value that indicates the significance level of the detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
2617.3
P
0.004484
AFFX-BioB-M_at
2563.3
P
0.005565
AFFX-BioB-3_at
1490.5
A
0.108979
AFFX-BioC-5_at
6458.1
P
0.000095
AFFX-BioC-3_at
6763.8
P
0.000044
AFFX-BioDn-5_at
11043
P
0.000044
AFFX-BioDn-3_at
39838.6
P
0.000297
AFFX-CreX-5_at
89907.6
P
0.000052
AFFX-CreX-3_at
107038.3
P
0.000044
AFFX-DapX-5_at
464.6
A
0.095667
AFFX-DapX-M_at
157.4
A
0.574038
AFFX-DapX-3_at
64.7
A
0.891021
AFFX-LysX-5_at
360
A
0.078002
AFFX-LysX-M_at
439.7
A
0.250777
AFFX-LysX-3_at
48
A
0.470241
AFFX-PheX-5_at
86.2
A
0.631562
AFFX-PheX-M_at
51.7
A
0.910522
AFFX-PheX-3_at
458.4
A
0.425962
AFFX-ThrX-5_at
154.5
A
0.41138
AFFX-ThrX-M_at
335.1
A
0.185131
Total number of rows:
54675
Table truncated, full table size
1489 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM280362.CEL.gz
5.3 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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