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GEO accession:
Sample GSM280298
Query DataSets for GSM280298
Status
Public on Apr 03, 2009
Title
Post Ctrl 1
Sample type
RNA
Source name
Post Vaccination Control Non Vaccinated tumor
Organism
Homo sapiens
Characteristics
Post Vaccination Control Non Vaccinated tumor
Extracted molecule
total RNA
Extraction protocol
Trizol extraction of total RNA was performed according to the Qiagen kit instructions.
Label
biotin
Label protocol
Standard Affymetrix
Hybridization protocol
Standard Affymetrix
Scan protocol
Standard Affymetrix
Description
RNA from frozen Glioblastoma Multiforme tumor
Data processing
MAS5 Normalized
Submission date
Apr 08, 2008
Last update date
Aug 28, 2018
Contact name
Gretchen Duvall
Organization name
Cedars Sinai Medical Center
Street address
8700 Beverly BLVD
City
Los Angeles
State/province
CA
ZIP/Postal code
90048
Country
USA
Platform ID
GPL570
Series (1)
GSE11100
Dendritic Cell Vaccine against Glioblastoma Multiforme Patients
Relations
Reanalyzed by
GSE119087
Data table header descriptions
ID_REF
VALUE
MAS5 calculated Signal intensity
ABS_CALL
The call in an absolute analysis that indicates if the transcript was Present P- Absent A- Marginal M- or No Call NC
DETECTION P-VALUE
p-value that indicates the significance level of the detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
2281.6
P
0.00141
AFFX-BioB-M_at
3488.8
P
0.002275
AFFX-BioB-3_at
1319.4
A
0.123572
AFFX-BioC-5_at
6734.6
P
0.00011
AFFX-BioC-3_at
8235.6
P
0.000044
AFFX-BioDn-5_at
12679.4
P
0.000044
AFFX-BioDn-3_at
46752
P
0.00011
AFFX-CreX-5_at
106008.9
P
0.000052
AFFX-CreX-3_at
121545.7
P
0.000044
AFFX-DapX-5_at
259
A
0.300606
AFFX-DapX-M_at
495.5
A
0.239063
AFFX-DapX-3_at
32
A
0.916408
AFFX-LysX-5_at
309.8
A
0.067661
AFFX-LysX-M_at
297.1
A
0.52976
AFFX-LysX-3_at
167.2
A
0.205732
AFFX-PheX-5_at
166
A
0.631562
AFFX-PheX-M_at
60.7
A
0.772364
AFFX-PheX-3_at
234.8
A
0.645547
AFFX-ThrX-5_at
291.9
A
0.455413
AFFX-ThrX-M_at
149.3
A
0.52976
Total number of rows:
54675
Table truncated, full table size
1489 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM280298.CEL.gz
5.2 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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