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Sample GSM277678 Query DataSets for GSM277678
Status Public on Mar 28, 2008
Title Lung - 346006
Sample type RNA
 
Source name Lung
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.6
Patient Age: 70-80
Gender: Female
Ethnic Background: Caucasian
Tobacco Use : Yes
Years of Tobacco Use: 26-30
Type of Tobacco Use: Cigarettes
Alcohol Consumption?: No
Family History of Cancer?: No
Days from Patient Diagnosis to Excision: 35
Presenting Symptoms: Hemoptysis
Workplace or household smokers?: No
Pathological T: 1
Pathological N: 0
Pathological M: 0
Pathological Stage: 1A
Pathological Grade: 3
Pathological Multiple Tumors: No
Pathological Stage During or Following Multimodality Therapy: No
Primary Site: Lung
Histology: Squamous cell carcinoma
 
Submission date Mar 27, 2008
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE60486
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 2121.9 P 0.000127
AFFX-BioB-M_at 3297.2 P 0.000044
AFFX-BioB-3_at 2016.3 P 0.000044
AFFX-BioC-5_at 5285.4 P 0.000052
AFFX-BioC-3_at 7627.3 P 0.000044
AFFX-BioDn-5_at 12549.1 P 0.000044
AFFX-BioDn-3_at 17180.0 P 0.000044
AFFX-CreX-5_at 59040.9 P 0.000052
AFFX-CreX-3_at 64515.7 P 0.000044
AFFX-DapX-5_at 1578.1 P 0.000081
AFFX-DapX-M_at 4052.9 P 0.000110
AFFX-DapX-3_at 6161.0 P 0.000044
AFFX-LysX-5_at 214.3 P 0.000081
AFFX-LysX-M_at 378.9 P 0.002275
AFFX-LysX-3_at 684.2 P 0.000070
AFFX-PheX-5_at 317.7 P 0.000110
AFFX-PheX-M_at 517.7 P 0.000169
AFFX-PheX-3_at 528.3 P 0.000095
AFFX-ThrX-5_at 428.8 P 0.000258
AFFX-ThrX-M_at 810.1 P 0.000052

Total number of rows: 54675

Table truncated, full table size 1470 Kbytes.




Supplementary file Size Download File type/resource
GSM277678.CEL.gz 4.2 Mb (ftp)(http) CEL
Processed data included within Sample table

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