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| Status |
Public on Oct 01, 2004 |
| Title |
GEIM4-U133A-DM |
| Sample type |
RNA |
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| Source name |
muscle
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| Organism |
Homo sapiens |
| Extracted molecule |
total RNA |
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| Description |
Muscle biopsy specimen from a patient with dermatomyositis (DM)
Keywords = Inflammatory myopathy, Dermatomyositis, Inclusion body myositis, Polymyositis, MxA, plasmacytoid dendritic cells, Innate immunity, Interferon-alpha
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| Submission date |
Jul 05, 2004 |
| Last update date |
May 27, 2005 |
| Contact name |
Steven Alan Greenberg |
| E-mail(s) |
sagreenberg@partners.org
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| Phone |
617 732-8641
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| Fax |
617 730-2885
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| Organization name |
Brigham and Women's Hospital
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| Department |
Neurology
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| Lab |
Division of Neuromuscular Disease
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| Street address |
75 Francis Street
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| City |
Boston |
| State/province |
MA |
| ZIP/Postal code |
02115 |
| Country |
USA |
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| Platform ID |
GPL96 |
| Series (1) |
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| Data table header descriptions |
| ID_REF |
Affymetrix U133A probeset ID |
| VALUE |
'signal' a measure of the abundance of a transcript |
| ABS_CALL |
the call (Detection) in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC) |
| DETECTION P-VALUE |
'detection p-value', p-value that indicates the significance level of the detection |
| Data table |
| ID_REF |
VALUE |
ABS_CALL |
DETECTION P-VALUE |
| AFFX-BioB-5_at |
1429.2 |
P |
0.01667 |
| AFFX-BioB-M_at |
2908.5 |
P |
0.002023 |
| AFFX-BioB-3_at |
1130.3 |
P |
0.002867 |
| AFFX-BioC-5_at |
3857 |
P |
0.000127 |
| AFFX-BioC-3_at |
3335.7 |
P |
0.000127 |
| AFFX-BioDn-5_at |
2885.5 |
P |
0.000147 |
| AFFX-BioDn-3_at |
24075.2 |
P |
0.000225 |
| AFFX-CreX-5_at |
29306.7 |
P |
0.000044 |
| AFFX-CreX-3_at |
51881.9 |
P |
0.000044 |
| AFFX-DapX-5_at |
176.4 |
A |
0.095667 |
| AFFX-DapX-M_at |
178.2 |
A |
0.39692 |
| AFFX-DapX-3_at |
148.9 |
A |
0.659339 |
| AFFX-LysX-5_at |
59.7 |
A |
0.5 |
| AFFX-LysX-M_at |
275.1 |
A |
0.382599 |
| AFFX-LysX-3_at |
32.4 |
A |
0.699394 |
| AFFX-PheX-5_at |
9.7 |
A |
0.804734 |
| AFFX-PheX-M_at |
40.6 |
A |
0.814869 |
| AFFX-PheX-3_at |
204.5 |
A |
0.574038 |
| AFFX-ThrX-5_at |
30.6 |
A |
0.876428 |
| AFFX-ThrX-M_at |
133.8 |
A |
0.470241 |
Total number of rows: 22283
Table truncated, full table size 604 Kbytes.
| Supplementary data files not provided |
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