NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM252368 Query DataSets for GSM252368
Status Public on Oct 01, 2008
Title sua5D 12th-2
Sample type RNA
 
Source name sua5D 300 generations after sporulation
Organism Saccharomyces cerevisiae
Characteristics background: dissection sproe of BY4743 MAT a
sua5 disruption
restreak on YPD plate 12 times, innoculate in 5ml YPD liquid medium
harvest at mid-log phase
Biomaterial provider Feilong Meng, from Telomere, telomerase and cellular aging group in SIBS
Treatment protocol innoculate in 5ml YPD liquid medium
harvest at mid-log phase
Growth protocol innoculate in 5ml YPD liquid medium
harvest at mid-log phase
Extracted molecule total RNA
Extraction protocol the RNeasy Mini Kit (Qiagen) and on-column DNase Digestion Kit (Qiagen)
Label biotin
Label protocol IVT Labeling Kit Affymetrix
 
Hybridization protocol Hybridization Control Kit Affymetrix
Scan protocol Gene array Scanner3000 Affymetrix
Description performed following Affymetrix standard protocols
Data processing GCOS1.2 Affymetrix
 
Submission date Dec 20, 2007
Last update date Dec 21, 2007
Contact name feilong meng
E-mail(s) flmeng@sibs.ac.cn
Phone 86-21-54921092
Fax 86-21-54921076
Organization name Shanghai institutes for biology sciences
Department SIBCB
Lab telomere and telomerase
Street address 320 yuyang road
City shanghai
ZIP/Postal code 200031
Country China
 
Platform ID GPL2529
Series (1)
GSE9985 sua5D expression profiles

Data table header descriptions
ID_REF
VALUE signal detection
ABS_CALL
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 116.172 P 8.14279e-05
AFFX-BioB-M_at 134.399 P 4.42873e-05
AFFX-BioB-3_at 107.278 P 4.42873e-05
AFFX-BioC-5_at 258.175 P 8.14279e-05
AFFX-BioC-3_at 380.66 P 4.42873e-05
AFFX-BioDn-5_at 760.877 P 4.42873e-05
AFFX-BioDn-3_at 1645.4 P 4.42873e-05
AFFX-CreX-5_at 3533.87 P 4.42873e-05
AFFX-CreX-3_at 3612.37 P 4.42873e-05
AFFX-DapX-5_at 403.183 P 4.42873e-05
AFFX-DapX-M_at 599.479 P 5.16732e-05
AFFX-DapX-3_at 559.793 P 5.16732e-05
AFFX-LysX-5_at 27.6478 P 4.42873e-05
AFFX-LysX-M_at 40.7905 P 0.000662269
AFFX-LysX-3_at 110.773 P 4.42873e-05
AFFX-PheX-5_at 55.8369 P 0.000117725
AFFX-PheX-M_at 67.511 P 4.42873e-05
AFFX-PheX-3_at 92.0861 P 5.16732e-05
AFFX-ThrX-5_at 96.1025 P 9.4506e-05
AFFX-ThrX-M_at 129.943 P 4.42873e-05

Total number of rows: 10928

Table truncated, full table size 338 Kbytes.




Supplementary file Size Download File type/resource
GSM252368.CEL.gz 1013.5 Kb (ftp)(http) CEL
GSM252368.CHP.gz 56.5 Kb (ftp)(http) CHP
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap