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GEO accession:
Sample GSM249026
Query DataSets for GSM249026
Status
Public on Jan 30, 2008
Title
Fibroblasts with GFP virus NHDF1 + GFP
Sample type
RNA
Source name
NHDF1
Organism
Homo sapiens
Characteristics
fibroblasts with GFP virus
Extracted molecule
total RNA
Extraction protocol
Stratagene
Label
biotin
Label protocol
affy HT IVT kit
Hybridization protocol
Affy Eukaryotic Hyb Kit
Scan protocol
Gene Chip scanner 3000
Description
standard protocols applied
Data processing
GCOS operating software
Submission date
Dec 12, 2007
Last update date
Aug 28, 2018
Contact name
William Lowry
E-mail(s)
blowry@ucla.edu
Organization name
UCLA
Department
MCDB
Lab
Lowry
Street address
621 Charles Young Drive
City
Los Angeles
State/province
CA
ZIP/Postal code
90095
Country
USA
Platform ID
GPL570
Series (1)
GSE9865
Expression profile of dermal fibroblasts reprogrammed to a pluripotent state
Relations
Reanalyzed by
GSE64985
Reanalyzed by
GSE119087
Data table header descriptions
ID_REF
VALUE
Signal
ABS_CALL
Present or absent
DETECTION P-VALUE
p-value of call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
1882.85
P
0.000753643
AFFX-BioB-M_at
2734.75
P
5.16732e-05
AFFX-BioB-3_at
2072.38
P
0.000296708
AFFX-BioC-5_at
5772.91
P
0.000126798
AFFX-BioC-3_at
6571.52
P
4.42873e-05
AFFX-BioDn-5_at
15679.9
P
4.42873e-05
AFFX-BioDn-3_at
26258.5
P
0.000195116
AFFX-CreX-5_at
87296.2
P
5.16732e-05
AFFX-CreX-3_at
101451
P
4.42873e-05
AFFX-DapX-5_at
34.2291
A
0.382589
AFFX-DapX-M_at
121.199
A
0.205732
AFFX-DapX-3_at
26.4016
A
0.804734
AFFX-LysX-5_at
64.0388
A
0.440641
AFFX-LysX-M_at
120.361
A
0.455413
AFFX-LysX-3_at
116.721
A
0.108959
AFFX-PheX-5_at
10.3817
A
0.969024
AFFX-PheX-M_at
8.72611
A
0.989683
AFFX-PheX-3_at
100.068
A
0.300606
AFFX-ThrX-5_at
21.9619
A
0.760937
AFFX-ThrX-M_at
101.749
A
0.313723
Total number of rows:
54675
Table truncated, full table size
1638 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM249026.CEL.gz
5.0 Mb
(ftp)
(http)
CEL
Processed data are available on Series record
Processed data included within Sample table
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