NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM2473127 Query DataSets for GSM2473127
Status Public on Aug 13, 2017
Title RMC-INI85
Sample type RNA
 
Source name Renal Medullary Carcinoma
Organism Homo sapiens
Characteristics tissue: RMC
Extracted molecule total RNA
Extraction protocol Total RNAs were collected from samples using the miRNeasy kit (Qiagen) according to the manufacturer's instructions
Label biotin
Label protocol According to the standard Affymetrix protocol
 
Hybridization protocol Hybridization performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Scan protocol Scanning were performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Data processing Arrays were normalized by the GCRMA procedure using Brainarray annotations (V.16.0.0, ENTREZG)
 
Submission date Jan 31, 2017
Last update date Aug 13, 2017
Contact name Wilfrid Richer
E-mail(s) wilfrid.richer@curie.fr
Organization name Institut Curie
Street address 26 rue d'Ulm
City Paris
ZIP/Postal code 75005
Country France
 
Platform ID GPL17810
Series (1)
GSE94321 Embryonic signature distinguishes pediatric and adult rhabdoid tumors from other SMARCB1-deficient cancers

Data table header descriptions
ID_REF
VALUE log2 GC-RMA signal

Data table
ID_REF VALUE
1_at 4.812439719
10_at 2.055403208
100_at 7.316556771
1000_at 4.130189606
10000_at 3.684471466
100009676_at 2.297179658
10001_at 6.564502276
10002_at 2.410400824
10003_at 2.479791252
10004_at 2.332202289
100048912_at 2.177966445
100049716_at 3.5193107
10005_at 5.101416371
10006_at 9.124817378
10007_at 7.257650858
10008_at 2.642160888
10009_at 6.593502348
100093630_at 8.974097287
1001_at 10.47937107
10010_at 7.651251489

Total number of rows: 18989

Table truncated, full table size 388 Kbytes.




Supplementary file Size Download File type/resource
GSM2473127_RB04_ARN0006_s1h1_U133p2.CEL.gz 4.4 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap