NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM2473117 Query DataSets for GSM2473117
Status Public on Aug 13, 2017
Title RT-INI39
Sample type RNA
 
Source name Rhabdoid Tumor
Organism Homo sapiens
Characteristics tissue: RT
Extracted molecule total RNA
Extraction protocol Total RNAs were collected from samples using the miRNeasy kit (Qiagen) according to the manufacturer's instructions
Label biotin
Label protocol According to the standard Affymetrix protocol
 
Hybridization protocol Hybridization performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Scan protocol Scanning were performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Data processing Arrays were normalized by the GCRMA procedure using Brainarray annotations (V.16.0.0, ENTREZG)
 
Submission date Jan 31, 2017
Last update date Aug 13, 2017
Contact name Wilfrid Richer
E-mail(s) wilfrid.richer@curie.fr
Organization name Institut Curie
Street address 26 rue d'Ulm
City Paris
ZIP/Postal code 75005
Country France
 
Platform ID GPL17810
Series (1)
GSE94321 Embryonic signature distinguishes pediatric and adult rhabdoid tumors from other SMARCB1-deficient cancers

Data table header descriptions
ID_REF
VALUE log2 GC-RMA signal

Data table
ID_REF VALUE
1_at 4.879878247
10_at 2.055776227
100_at 9.016875818
1000_at 3.120323933
10000_at 4.569026794
100009676_at 2.290978539
10001_at 7.02740592
10002_at 2.419458403
10003_at 2.54062393
10004_at 2.255375119
100048912_at 2.192939216
100049716_at 3.248001877
10005_at 5.354861843
10006_at 8.511884962
10007_at 8.646934746
10008_at 2.567301595
10009_at 6.617815281
100093630_at 10.13520244
1001_at 3.153274332
10010_at 6.877591124

Total number of rows: 18989

Table truncated, full table size 388 Kbytes.




Supplementary file Size Download File type/resource
GSM2473117_INI39_s1p1h1_.CEL.gz 7.7 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap