|
| Status |
Public on Oct 29, 2008 |
| Title |
Scraped off mucosal layer, S2 |
| Sample type |
RNA |
| |
|
| Source name |
Scraped off mucosal layer
|
| Organism |
Homo sapiens |
| Characteristics |
Cell type: Normal cells
Tumor stage: Non tumor
|
| Treatment protocol |
We used three frozen specimens from normal ileum (N) and three from scraped off normal mucosa layer of the ileum (S), which is enriched for neuroendocrine cells as normal tissue references.
|
| Growth protocol |
Snap-frozen tissue blocks from 8 individual patients were included in the study.
|
| Extracted molecule |
total RNA |
| Extraction protocol |
RNeasy Mini Kit
|
| Label |
Biotin
|
| Label protocol |
Affymetrix standard protocol
|
| |
|
| Hybridization protocol |
Affymetrix standard protocol
|
| Scan protocol |
GCOS
|
| Description |
Gene expression data from scrapped off mucosa normal cells, replicate 2
|
| Data processing |
GCOS; SAM analyses; binary indexing algorithm
|
| |
|
| Submission date |
Nov 09, 2007 |
| Last update date |
Aug 28, 2018 |
| Contact name |
Jean-Baptiste Demoulin |
| Organization name |
Université catholique de Louvain
|
| Department |
de Duve Institute
|
| Lab |
UCL - MEXP
|
| Street address |
av Hippocrate 75, B1.74.05
|
| City |
Brussels |
| ZIP/Postal code |
B-1200 |
| Country |
Belgium |
| |
|
| Platform ID |
GPL570 |
| Series (1) |
| GSE9576 |
Gene expression profiling of classical midgut carcinoid primary tumors and liver metastasis |
|
| Relations |
| Reanalyzed by |
GSE119087 |
