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Sample GSM234775 Query DataSets for GSM234775
Status Public on Dec 31, 2008
Title Mouse_Klf5 KO_ES_clone 2
Sample type RNA
 
Source name Mouse_Klf5 KO_ES_clone 2
Organism Mus musculus
Characteristics Mouse_E14 ES cell_Undifferentialted
Growth protocol ES medium + 15% FBS +LIF
Extracted molecule total RNA
Extraction protocol RNeasy mini Kit
Label biotin
Label protocol Affymetrix
GeneChip Expression Analysis
Technical manual
Rev 3
 
Hybridization protocol Affymetrix
GeneChip Expression Analysis
Technical manual
Rev 3
Scan protocol Affymetrix
GeneChip Expression Analysis
Technical manual
Rev 3
Description Affymetrix
GeneChip Expression Analysis
Technical manual
Rev 3
Data processing Affymetrix
GeneChip Expression Analysis
Technical manual
Rev 3
 
Submission date Oct 04, 2007
Last update date Aug 28, 2018
Contact name Kazuhiko Uchida
E-mail(s) kazuhiko.uchida@cbiri.org
Phone 81-29-861-3000
Fax 81-29-855-5271
Organization name University of Tsukuba
Department Institute of Basic Medical Sciences
Lab Molecular and biological Oncology
Street address 1-1-1 Tennnoudai
City Tsukuba
State/province Ibaraki
ZIP/Postal code 305-8575
Country Japan
 
Platform ID GPL1261
Series (1)
GSE9244 WT vs Klf5 KO ES
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE signal
ABS_CALL detection call
DETECTION P-VALUE detection p-value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 143.144 P 0.000296708
AFFX-BioB-M_at 222.037 P 5.16732e-05
AFFX-BioB-3_at 152.531 P 5.16732e-05
AFFX-BioC-5_at 427.599 P 5.16732e-05
AFFX-BioC-3_at 596.112 P 4.42873e-05
AFFX-BioDn-5_at 1124.63 P 4.42873e-05
AFFX-BioDn-3_at 1695.7 P 6.02111e-05
AFFX-CreX-5_at 5541.27 P 5.16732e-05
AFFX-CreX-3_at 6315.83 P 4.42873e-05
AFFX-DapX-5_at 22.316 P 0.000856509
AFFX-DapX-M_at 99.2391 P 0.000856509
AFFX-DapX-3_at 172.524 P 0.000258358
AFFX-LysX-5_at 7.30484 P 0.00933229
AFFX-LysX-M_at 17.688 A 0.195266
AFFX-LysX-3_at 73.9096 P 7.00668e-05
AFFX-PheX-5_at 7.97629 A 0.0780018
AFFX-PheX-M_at 12.3343 A 0.102165
AFFX-PheX-3_at 27.7989 P 0.000753643
AFFX-ThrX-5_at 12.8953 A 0.227617
AFFX-ThrX-M_at 23.6485 P 0.00933229

Total number of rows: 45101

Table truncated, full table size 1385 Kbytes.




Supplementary file Size Download File type/resource
GSM234775.CEL.gz 3.5 Mb (ftp)(http) CEL
GSM234775.CHP.gz 246.9 Kb (ftp)(http) CHP
Processed data included within Sample table

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