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Sample GSM234774 Query DataSets for GSM234774
Status Public on Dec 31, 2008
Title Mouse_Klf5 KO_ES_clone 1
Sample type RNA
 
Source name Mouse_Klf5 KO_ES_clone 1
Organism Mus musculus
Characteristics Mouse_E14 ES cell_Undifferentialted
Growth protocol ES medium + 15% FBS +LIF
Extracted molecule total RNA
Extraction protocol RNeasy mini Kit
Label biotin
Label protocol Affymetrix
GeneChip Expression Analysis
Technical manual
Rev 3
 
Hybridization protocol Affymetrix
GeneChip Expression Analysis
Technical manual
Rev 3
Scan protocol Affymetrix
GeneChip Expression Analysis
Technical manual
Rev 3
Description Affymetrix
GeneChip Expression Analysis
Technical manual
Rev 3
Data processing Affymetrix
GeneChip Expression Analysis
Technical manual
Rev 3
 
Submission date Oct 04, 2007
Last update date Aug 28, 2018
Contact name Kazuhiko Uchida
E-mail(s) kazuhiko.uchida@cbiri.org
Phone 81-29-861-3000
Fax 81-29-855-5271
Organization name University of Tsukuba
Department Institute of Basic Medical Sciences
Lab Molecular and biological Oncology
Street address 1-1-1 Tennnoudai
City Tsukuba
State/province Ibaraki
ZIP/Postal code 305-8575
Country Japan
 
Platform ID GPL1261
Series (1)
GSE9244 WT vs Klf5 KO ES
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE signal
ABS_CALL detection call
DETECTION P-VALUE detection p-value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 166.175 P 0.000340305
AFFX-BioB-M_at 222.833 P 4.42873e-05
AFFX-BioB-3_at 156.478 P 4.42873e-05
AFFX-BioC-5_at 492.988 P 5.16732e-05
AFFX-BioC-3_at 594.968 P 4.42873e-05
AFFX-BioDn-5_at 1245.1 P 4.42873e-05
AFFX-BioDn-3_at 1838.49 P 4.42873e-05
AFFX-CreX-5_at 6075 P 5.16732e-05
AFFX-CreX-3_at 7057.56 P 4.42873e-05
AFFX-DapX-5_at 32.1881 P 0.000509415
AFFX-DapX-M_at 110.196 P 0.000856509
AFFX-DapX-3_at 200.084 P 0.000258358
AFFX-LysX-5_at 9.00728 P 0.00687065
AFFX-LysX-M_at 12.022 A 0.250796
AFFX-LysX-3_at 49.6933 P 0.00010954
AFFX-PheX-5_at 6.51297 A 0.300591
AFFX-PheX-M_at 15.0958 A 0.123572
AFFX-PheX-3_at 29.0173 P 0.000169227
AFFX-ThrX-5_at 10.3144 A 0.15671
AFFX-ThrX-M_at 20.183 P 0.00448081

Total number of rows: 45101

Table truncated, full table size 1386 Kbytes.




Supplementary file Size Download File type/resource
GSM234774.CEL.gz 3.4 Mb (ftp)(http) CEL
GSM234774.CHP.gz 247.7 Kb (ftp)(http) CHP
Processed data included within Sample table

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