|
| Status |
Public on Sep 07, 2016 |
| Title |
CD8_TILs_DN_rep3 |
| Sample type |
RNA |
| |
|
| Source name |
CD8+Tim3-PD1- TILs from CT26 colon carcinoma-bearing Balb/c mice
|
| Organism |
Mus musculus |
| Characteristics |
cell type: CD8+Tim3-PD1- TILs
|
| Extracted molecule |
total RNA |
| Extraction protocol |
none provided by submitter
|
| Label |
biotin
|
| Label protocol |
standard Affymetrix protocol
|
| |
|
| Hybridization protocol |
standard Affymetrix protocol
|
| Scan protocol |
standard Affymetrix protocol
|
| Data processing |
.CEL files were RMA normalized and merged to an expression matrix using the ExpressionFileCreator of GenePattern with default parameters (Reich et al., 2006).
|
| |
|
| Submission date |
Aug 23, 2016 |
| Last update date |
Sep 07, 2016 |
| Contact name |
Meromit Singer |
| E-mail(s) |
msinger@broadinstitute.org
|
| Organization name |
Broad Institute of MIT and Harvard
|
| Street address |
415 main st, ROOM 6031
|
| City |
CAMBRIDGE |
| State/province |
MASSACHUSETTS |
| ZIP/Postal code |
02142 |
| Country |
USA |
| |
|
| Platform ID |
GPL1261 |
| Series (2) |
| GSE85947 |
Expression data for CD8 TILs subpopulations sorted by Tim3 and PD1 |
| GSE86042 |
A distinct gene module uncouples dysfunction from activation in tumor-infiltrating T cells |
|
