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Sample GSM2256553 Query DataSets for GSM2256553
Status Public on Jul 01, 2017
Title Subject 16 NL
Sample type RNA
 
Source name Skin Tissue Biopsy
Organism Homo sapiens
Characteristics timepoint: NL
treatment: MTX
tissue: Skin Tissue
pasi: NA
Extracted molecule total RNA
Extraction protocol RNEasy Mini Kit (Qiagen) was used for RNA extraction
Label biotin
Label protocol Target AMP-Nano labelling kit for Illumina Expression Beadchip
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Subject 16
Data processing The data were normalised using quantile normalisation with lumiN function in R
 
Submission date Aug 01, 2016
Last update date Jul 01, 2017
Contact name Joel M Correa da Rosa
E-mail(s) jcorreadar@rockefeller.edu
Phone 9175313089
Organization name Rockefeller University
Department CTSA
Lab Investigative Dermatology
Street address 1230 York Avenue
City New York
State/province New York
ZIP/Postal code 10065
Country USA
 
Platform ID GPL10558
Series (1)
GSE85034 Shrinking the Psoriasis assessment gap: Early gene-expression profiling accurately predicts response to long-term treatment

Data table header descriptions
ID_REF
VALUE quantile normalized
Detect.Pval.90

Data table
ID_REF VALUE Detect.Pval.90
ILMN_1762337 6.565390706 0.65584
ILMN_2055271 6.672341132 0.1961
ILMN_1736007 6.624550952 0.39221
ILMN_2383229 6.656005728 0.25714
ILMN_1806310 6.574152099 0.60649
ILMN_1779670 6.623055783 0.3987
ILMN_1653355 6.583079161 0.56104
ILMN_1717783 6.510168932 0.87922
ILMN_1705025 6.588961936 0.53636
ILMN_1814316 6.638177266 0.34156
ILMN_2359168 6.544553947 0.75065
ILMN_1731507 6.408661596 0.99481
ILMN_1787689 6.677765698 0.18052
ILMN_3241953 6.940881772 0.00909
ILMN_1745607 10.818792 0
ILMN_2136495 8.567764805 0
ILMN_1668111 6.572734824 0.61688
ILMN_2295559 6.661392501 0.23636
ILMN_1735045 7.857856841 0.0013
ILMN_1680754 6.714163275 0.10519

Total number of rows: 47323

Table truncated, full table size 1474 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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