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Sample GSM2256505 Query DataSets for GSM2256505
Status Public on Jul 01, 2017
Title Subject 7 WK 16
Sample type RNA
 
Source name Skin Tissue Biopsy
Organism Homo sapiens
Characteristics timepoint: WK 16
treatment: MTX
tissue: Skin Tissue
pasi: 10.1
Extracted molecule total RNA
Extraction protocol RNEasy Mini Kit (Qiagen) was used for RNA extraction
Label biotin
Label protocol Target AMP-Nano labelling kit for Illumina Expression Beadchip
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Subject 7
Data processing The data were normalised using quantile normalisation with lumiN function in R
 
Submission date Aug 01, 2016
Last update date Jul 01, 2017
Contact name Joel M Correa da Rosa
E-mail(s) jcorreadar@rockefeller.edu
Phone 9175313089
Organization name Rockefeller University
Department CTSA
Lab Investigative Dermatology
Street address 1230 York Avenue
City New York
State/province New York
ZIP/Postal code 10065
Country USA
 
Platform ID GPL10558
Series (1)
GSE85034 Shrinking the Psoriasis assessment gap: Early gene-expression profiling accurately predicts response to long-term treatment

Data table header descriptions
ID_REF
VALUE quantile normalized
Detect.Pval.42

Data table
ID_REF VALUE Detect.Pval.42
ILMN_1762337 6.685829062 0.17922
ILMN_2055271 6.792641158 0.02597
ILMN_1736007 6.50283171 0.88831
ILMN_2383229 6.533254005 0.79221
ILMN_1806310 6.639353054 0.31039
ILMN_1779670 6.632852549 0.33896
ILMN_1653355 6.597969064 0.5013
ILMN_1717783 6.421637919 0.98831
ILMN_1705025 6.623018186 0.39221
ILMN_1814316 6.664742613 0.22468
ILMN_2359168 6.499932734 0.8961
ILMN_1731507 6.460395335 0.96104
ILMN_1787689 6.492927814 0.91169
ILMN_3241953 7.052469944 0.0039
ILMN_1745607 10.27657144 0
ILMN_2136495 10.01219947 0
ILMN_1668111 6.499932734 0.89481
ILMN_2295559 6.528156889 0.80909
ILMN_1735045 7.263680247 0.0026
ILMN_1680754 6.728151309 0.08701

Total number of rows: 47323

Table truncated, full table size 1482 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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