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Sample GSM2256470 Query DataSets for GSM2256470
Status Public on Jul 01, 2017
Title Subject 2 NL
Sample type RNA
 
Source name Skin Tissue Biopsy
Organism Homo sapiens
Characteristics timepoint: NL
treatment: MTX
tissue: Skin Tissue
pasi: NA
Extracted molecule total RNA
Extraction protocol RNEasy Mini Kit (Qiagen) was used for RNA extraction
Label biotin
Label protocol Target AMP-Nano labelling kit for Illumina Expression Beadchip
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Subject 2
Data processing The data were normalised using quantile normalisation with lumiN function in R
 
Submission date Aug 01, 2016
Last update date Jul 01, 2017
Contact name Joel M Correa da Rosa
E-mail(s) jcorreadar@rockefeller.edu
Phone 9175313089
Organization name Rockefeller University
Department CTSA
Lab Investigative Dermatology
Street address 1230 York Avenue
City New York
State/province New York
ZIP/Postal code 10065
Country USA
 
Platform ID GPL10558
Series (1)
GSE85034 Shrinking the Psoriasis assessment gap: Early gene-expression profiling accurately predicts response to long-term treatment

Data table header descriptions
ID_REF
VALUE quantile normalized
Detect.Pval.7

Data table
ID_REF VALUE Detect.Pval.7
ILMN_1762337 6.731423093 0.11169
ILMN_2055271 6.778830552 0.06364
ILMN_1736007 6.641756828 0.34545
ILMN_2383229 6.665969207 0.26883
ILMN_1806310 6.787200532 0.04935
ILMN_1779670 6.48649094 0.8987
ILMN_1653355 6.627934527 0.40649
ILMN_1717783 6.543045369 0.73636
ILMN_1705025 6.719448294 0.12597
ILMN_1814316 6.682375867 0.21429
ILMN_2359168 6.550547571 0.71688
ILMN_1731507 6.516235255 0.82597
ILMN_1787689 6.52937791 0.78182
ILMN_3241953 6.968042285 0.01169
ILMN_1745607 10.50498908 0
ILMN_2136495 7.880793108 0.0013
ILMN_1668111 6.592274062 0.56883
ILMN_2295559 6.709874718 0.13636
ILMN_1735045 7.475270467 0.0013
ILMN_1680754 6.71702355 0.12727

Total number of rows: 47323

Table truncated, full table size 1470 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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