|
Status |
Public on Aug 29, 2016 |
Title |
Inflammatory 24 |
Sample type |
RNA |
|
|
Source name |
Whole Blood from patient with JIA
|
Organism |
Homo sapiens |
Characteristics |
tissue: whole blood category: JIA dataset: Validation - inflammatory cohort gender: Male
|
Extracted molecule |
total RNA |
Extraction protocol |
Standard PAXgene® blood RNA extraction kit protocol (Qiagen).
|
Label |
biotin
|
Label protocol |
Standard Illumina TotalPrep RNA Amplification kits (Applied Biosystems).
|
|
|
Hybridization protocol |
Standard Illumina hybridisation protocol.
|
Scan protocol |
Standard Illumina scanning protocol.
|
Data processing |
The data were normalised using RSN, after background subtraction and filtering for transcripts common to Illumina HT12-V3
|
|
|
Submission date |
Apr 18, 2016 |
Last update date |
Aug 29, 2016 |
Contact name |
Victoria Wright |
E-mail(s) |
v.wright@imperial.ac.uk
|
Organization name |
Imperial College London
|
Department |
Paediatrics
|
Lab |
Wright Fleming Institute
|
Street address |
Norfolk Place
|
City |
London |
ZIP/Postal code |
W2 1PG |
Country |
United Kingdom |
|
|
Platform ID |
GPL10558 |
Series (2) |
GSE72829 |
Diagnosis of childhood bacterial and viral infection using host RNA expression |
GSE80412 |
Diagnosis of childhood bacterial and viral infection using host RNA expression - Inflammatory validation cohort |
|