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Sample GSM2113109 Query DataSets for GSM2113109
Status Public on Dec 19, 2017
Title 6_Ctrl_P21
Sample type RNA
Source name whole lung
Organism Rattus norvegicus
Characteristics age: P21 of life
sample origin: Ctrl diet during gestation
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using the Rneasy Qiagen kit (Qiagen, Courtaboeuf, France), according to the manufacturer's instructions.
Label biotin
Label protocol After validation of the RNA quality with Bioanalyzer 2100, 1 µg of total RNA was biotin labelled following the FlashTag Biotin HSR RNA labelling kit (Affymetrix).
Hybridization protocol Following fragmentation, mirRNA targets were hybridized for 20 hr at 48C on mirRNA-40 Affymetrix. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
Scan protocol GeneChips were scanned using the GCS 3000 scanner (Affymetrix)
Data processing The data were preprocessed and analyzing using Partek Genomic Suite.
Submission date Apr 11, 2016
Last update date Dec 19, 2017
Contact name Céline Méhats
Organization name Inserm
Department U1016
Street address 24 rue du Faubourg St jacques
City Paris
ZIP/Postal code 75014
Country France
Platform ID GPL19117
Series (1)
GSE80123 microRNA expression profile in whole lung of rat pups at P10 or P21 day of life after a intrauterine growth restriction due to a low protein diet during gestation

Data table header descriptions

Data table
14q0_st 0.678609
14qI-1_st 0.93439
14qI-1_x_st 0.906404
14qI-2_st 0.907019
14qI-3_x_st 0.568927
14qI-4_st 0.520758
14qI-4_x_st 0.778403
14qI-5_st 0.446757
14qI-6_st 0.647512
14qI-7_st 1.22623
14qI-8_st 0.529273
14qI-8_x_st 0.475451
14qI-9_x_st 0.629544
14qII-10_st 0.498356
14qII-11_st 0.6204
14qII-12_st 0.589515
14qII-12_x_st 0.576117
14qII-13_st 0.9238
14qII-14_st 0.94876
14qII-14_x_st 0.952075

Total number of rows: 36353

Table truncated, full table size 868 Kbytes.

Supplementary file Size Download File type/resource
GSM2113109_6_miRNA-4_0_.CEL.gz 710.8 Kb (ftp)(http) CEL
Processed data included within Sample table

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