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Sample GSM206552 Query DataSets for GSM206552
Status Public on Aug 31, 2007
Title SW480
Sample type RNA
 
Source name SW480 cell line, RPMI1640, 10%FBS, 2mM L-glutamine, 10mM HEPES
Organism Homo sapiens
Characteristics No treatment. See ATCC/DSMZ for cell line details.
Growth protocol B128RPMI1640, 10%FBS, 2mM L-glutamine, 10mM HEPES
Extracted molecule total RNA
Extraction protocol Affymetrix standard protocols. See Clin Cancer Res 2005;11(24) December 15, 2005
Label biotin
Label protocol Affymetrix standard protocols. See Clin Cancer Res 2005;11(24) December 15, 2005
 
Hybridization protocol Affymetrix standard protocols. See Clin Cancer Res 2005;11(24) December 15, 2005
Scan protocol Affymetrix standard protocols. See Clin Cancer Res 2005;11(24) December 15, 2005
Description Baseline gene expression for cancer cell line grown in vitro
Data processing The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings (see Clin Cancer Res 2005;11(24) December 15, 2005). The mean value of replicates was used.
 
Submission date Jun 29, 2007
Last update date Aug 28, 2018
Contact name Guy Cavet
Organization name Genentech, Inc.
Street address 1 DNA Way MS93
City South San Francisco
State/province CA
ZIP/Postal code 94080
Country USA
 
Platform ID GPL570
Series (1)
GSE8332 Death receptor O-glycosylation controls tumor-cell sensitivity to the proapoptotic ligand Apo2L/TRAIL
Relations
Reanalyzed by GSE39923
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE MAS5.0 signal intensity

Data table
ID_REF VALUE
AFFX-BioB-5_at 374.13
AFFX-BioB-M_at 612.9
AFFX-BioB-3_at 324.82
AFFX-BioC-5_at 1010.35
AFFX-BioC-3_at 929.48
AFFX-BioDn-5_at 1211.94
AFFX-BioDn-3_at 5672.55
AFFX-CreX-5_at 13596.83
AFFX-CreX-3_at 15261.01
AFFX-DapX-5_at 1959.5
AFFX-DapX-M_at 3463.23
AFFX-DapX-3_at 4099.31
AFFX-LysX-5_at 480.75
AFFX-LysX-M_at 646.9
AFFX-LysX-3_at 1179.26
AFFX-PheX-5_at 576.2
AFFX-PheX-M_at 683.69
AFFX-PheX-3_at 450.32
AFFX-ThrX-5_at 12106.49
AFFX-ThrX-M_at 16782.16

Total number of rows: 54675

Table truncated, full table size 925 Kbytes.




Supplementary file Size Download File type/resource
GSM206552_1.CEL.gz 5.0 Mb (ftp)(http) CEL
GSM206552_2.CEL.gz 5.0 Mb (ftp)(http) CEL
Processed data included within Sample table

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