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Sample GSM206509 Query DataSets for GSM206509
Status Public on Aug 31, 2007
Title HPAC
Sample type RNA
 
Source name HPAC cell line, RPMI1640, 10%FBS, 2mM L-glutamine, 10mM HEPES
Organism Homo sapiens
Characteristics No treatment. See ATCC/DSMZ for cell line details.
Growth protocol B128RPMI1640, 10%FBS, 2mM L-glutamine, 10mM HEPES
Extracted molecule total RNA
Extraction protocol Affymetrix standard protocols. See Clin Cancer Res 2005;11(24) December 15, 2005
Label biotin
Label protocol Affymetrix standard protocols. See Clin Cancer Res 2005;11(24) December 15, 2005
 
Hybridization protocol Affymetrix standard protocols. See Clin Cancer Res 2005;11(24) December 15, 2005
Scan protocol Affymetrix standard protocols. See Clin Cancer Res 2005;11(24) December 15, 2005
Description Baseline gene expression for cancer cell line grown in vitro
Data processing The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings (see Clin Cancer Res 2005;11(24) December 15, 2005). The mean value of replicates was used.
 
Submission date Jun 29, 2007
Last update date Aug 28, 2018
Contact name Guy Cavet
Organization name Genentech, Inc.
Street address 1 DNA Way MS93
City South San Francisco
State/province CA
ZIP/Postal code 94080
Country USA
 
Platform ID GPL570
Series (1)
GSE8332 Death receptor O-glycosylation controls tumor-cell sensitivity to the proapoptotic ligand Apo2L/TRAIL
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE MAS5.0 signal intensity

Data table
ID_REF VALUE
AFFX-BioB-5_at 431.063
AFFX-BioB-M_at 624.999
AFFX-BioB-3_at 184.933
AFFX-BioC-5_at 1088.613
AFFX-BioC-3_at 871.464
AFFX-BioDn-5_at 1193.687
AFFX-BioDn-3_at 5463.271
AFFX-CreX-5_at 13846.525
AFFX-CreX-3_at 15033.014
AFFX-DapX-5_at 5762.492
AFFX-DapX-M_at 10335.949
AFFX-DapX-3_at 13705.558
AFFX-LysX-5_at 1300.588
AFFX-LysX-M_at 1876.846
AFFX-LysX-3_at 4159.96
AFFX-PheX-5_at 2405.02
AFFX-PheX-M_at 2976.615
AFFX-PheX-3_at 2243.767
AFFX-ThrX-5_at 24572.445
AFFX-ThrX-M_at 29442.301

Total number of rows: 54675

Table truncated, full table size 978 Kbytes.




Supplementary file Size Download File type/resource
GSM206509.CEL.gz 4.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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