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Sample GSM206467 Query DataSets for GSM206467
Status Public on Aug 31, 2007
Title DLD1
Sample type RNA
 
Source name DLD-1 cell line, RPMI1640, 10%FBS, 2mM L-glutamine, 10mM HEPES
Organism Homo sapiens
Characteristics No treatment. See ATCC/DSMZ for cell line details.
Growth protocol B128RPMI1640, 10%FBS, 2mM L-glutamine, 10mM HEPES
Extracted molecule total RNA
Extraction protocol Affymetrix standard protocols. See Clin Cancer Res 2005;11(24) December 15, 2005
Label biotin
Label protocol Affymetrix standard protocols. See Clin Cancer Res 2005;11(24) December 15, 2005
 
Hybridization protocol Affymetrix standard protocols. See Clin Cancer Res 2005;11(24) December 15, 2005
Scan protocol Affymetrix standard protocols. See Clin Cancer Res 2005;11(24) December 15, 2005
Description Baseline gene expression for cancer cell line grown in vitro
Data processing The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings (see Clin Cancer Res 2005;11(24) December 15, 2005). The mean value of replicates was used.
 
Submission date Jun 29, 2007
Last update date Aug 28, 2018
Contact name Guy Cavet
Organization name Genentech, Inc.
Street address 1 DNA Way MS93
City South San Francisco
State/province CA
ZIP/Postal code 94080
Country USA
 
Platform ID GPL570
Series (1)
GSE8332 Death receptor O-glycosylation controls tumor-cell sensitivity to the proapoptotic ligand Apo2L/TRAIL
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE MAS5.0 signal intensity

Data table
ID_REF VALUE
AFFX-BioB-5_at 398.48
AFFX-BioB-M_at 723.89
AFFX-BioB-3_at 378.57
AFFX-BioC-5_at 1092.17
AFFX-BioC-3_at 1009.57
AFFX-BioDn-5_at 1487.33
AFFX-BioDn-3_at 5252.21
AFFX-CreX-5_at 12884.61
AFFX-CreX-3_at 13419.95
AFFX-DapX-5_at 624.49
AFFX-DapX-M_at 1192.64
AFFX-DapX-3_at 1356.94
AFFX-LysX-5_at 172.62
AFFX-LysX-M_at 246.38
AFFX-LysX-3_at 425.29
AFFX-PheX-5_at 292.01
AFFX-PheX-M_at 407.14
AFFX-PheX-3_at 350.09
AFFX-ThrX-5_at 4258.22
AFFX-ThrX-M_at 7185.45

Total number of rows: 54675

Table truncated, full table size 921 Kbytes.




Supplementary file Size Download File type/resource
GSM206467_1.CEL.gz 5.8 Mb (ftp)(http) CEL
GSM206467_2.CEL.gz 5.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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