NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM206439 Query DataSets for GSM206439
Status Public on Aug 31, 2007
Title 888
Sample type RNA
 
Source name 888 cell line, RPMI1640, 10%FBS, 2mM L-glutamine, 10mM HEPES
Organism Homo sapiens
Characteristics No treatment. See ATCC/DSMZ for cell line details.
Growth protocol B128RPMI1640, 10%FBS, 2mM L-glutamine, 10mM HEPES
Extracted molecule total RNA
Extraction protocol Affymetrix standard protocols. See Clin Cancer Res 2005;11(24) December 15, 2005
Label biotin
Label protocol Affymetrix standard protocols. See Clin Cancer Res 2005;11(24) December 15, 2005
 
Hybridization protocol Affymetrix standard protocols. See Clin Cancer Res 2005;11(24) December 15, 2005
Scan protocol Affymetrix standard protocols. See Clin Cancer Res 2005;11(24) December 15, 2005
Description Baseline gene expression for cancer cell line grown in vitro
Data processing The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings (see Clin Cancer Res 2005;11(24) December 15, 2005). The mean value of replicates was used.
 
Submission date Jun 29, 2007
Last update date Aug 28, 2018
Contact name Guy Cavet
Organization name Genentech, Inc.
Street address 1 DNA Way MS93
City South San Francisco
State/province CA
ZIP/Postal code 94080
Country USA
 
Platform ID GPL570
Series (1)
GSE8332 Death receptor O-glycosylation controls tumor-cell sensitivity to the proapoptotic ligand Apo2L/TRAIL
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE MAS5.0 signal intensity

Data table
ID_REF VALUE
AFFX-BioB-5_at 446.738
AFFX-BioB-M_at 656.235
AFFX-BioB-3_at 368.215
AFFX-BioC-5_at 1430.127
AFFX-BioC-3_at 1808.349
AFFX-BioDn-5_at 2865.796
AFFX-BioDn-3_at 8407.457
AFFX-CreX-5_at 20105.553
AFFX-CreX-3_at 23680.85
AFFX-DapX-5_at 243.36
AFFX-DapX-M_at 413.508
AFFX-DapX-3_at 603.781
AFFX-LysX-5_at 54.378
AFFX-LysX-M_at 112.493
AFFX-LysX-3_at 134.117
AFFX-PheX-5_at 31.487
AFFX-PheX-M_at 51.449
AFFX-PheX-3_at 114.676
AFFX-ThrX-5_at 88.424
AFFX-ThrX-M_at 117.669

Total number of rows: 54675

Table truncated, full table size 973 Kbytes.




Supplementary file Size Download File type/resource
GSM206439.CEL.gz 5.0 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap