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Sample GSM203403 Query DataSets for GSM203403
Status Public on Jun 22, 2007
Title R743P00701
Sample type RNA
Source name prostate cancer sample
Organism Homo sapiens
Characteristics Percentage of Tumor:not Known
Percentage of Stroma:not Known
Percentage of BPH:not Known
Percentage of Atrophic Gland:not Known
Extracted molecule total RNA
Extraction protocol QiaGen Rneasy extraction of total RNA was performed according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
Hybridization protocol Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
Scan protocol GeneChips were scanned using the Affymetrix Scanner.
Description prostate
Data processing The data were analyzed and normalized with RMA.
Submission date Jun 21, 2007
Last update date Aug 14, 2011
Contact name Yipeng Wang
Phone 8585813960
Organization name Vaccine Research Institute of San Diego
Street address
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
Platform ID GPL96
Series (1)
GSE8218 Gene expression data from prostate cancer samples

Data table header descriptions
VALUE RMA calculated log2 Signal intensity

Data table
1007_s_at 10.36011868
1053_at 6.314379102
117_at 6.779998018
121_at 9.640649361
1255_g_at 4.857712188
1294_at 8.379894939
1316_at 6.249754924
1320_at 5.729572796
1405_i_at 6.189049702
1431_at 4.771660749
1438_at 8.315502573
1487_at 8.057639375
1494_f_at 7.343941244
1598_g_at 10.89688754
160020_at 8.839663582
1729_at 8.191156514
1773_at 6.923192626
177_at 6.203083938
179_at 9.850828142
1861_at 7.326268349

Total number of rows: 22283

Table truncated, full table size 496 Kbytes.

Supplementary file Size Download File type/resource
GSM203403.CEL.gz 3.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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