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Sample GSM203264 Query DataSets for GSM203264
Status Public on Jun 22, 2007
Title R424P00100
Sample type RNA
Source name prostate cancer sample
Organism Homo sapiens
Characteristics Percentage of Tumor: 0%
Percentage of Stroma: 50%
Percentage of BPH: 50%
Percentage of Atrophic Gland: 0%
Extracted molecule total RNA
Extraction protocol QiaGen Rneasy extraction of total RNA was performed according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
Hybridization protocol Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
Scan protocol GeneChips were scanned using the Affymetrix Scanner.
Description prostate
Data processing The data were analyzed and normalized with RMA.
Submission date Jun 21, 2007
Last update date Aug 14, 2011
Contact name Yipeng Wang
Phone 8585813960
Organization name Vaccine Research Institute of San Diego
Street address
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
Platform ID GPL96
Series (1)
GSE8218 Gene expression data from prostate cancer samples

Data table header descriptions
VALUE RMA calculated log2 Signal intensity

Data table
1007_s_at 10.88064222
1053_at 6.395454234
117_at 6.734277472
121_at 9.547635055
1255_g_at 4.793238615
1294_at 8.419223447
1316_at 5.969297479
1320_at 5.662014785
1405_i_at 6.50792768
1431_at 4.749768543
1438_at 8.713949515
1487_at 8.490592836
1494_f_at 7.428776003
1598_g_at 10.78644104
160020_at 8.719978184
1729_at 8.343881111
1773_at 6.630315769
177_at 6.291629305
179_at 9.953508157
1861_at 7.379089646

Total number of rows: 22283

Table truncated, full table size 496 Kbytes.

Supplementary file Size Download File type/resource
GSM203264.CEL.gz 3.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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