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Sample GSM194194 Query DataSets for GSM194194
Status Public on May 26, 2009
Title HighSES 5
Sample type RNA
Source name Peripheral blood CD2+ leukocytes
Organism Homo sapiens
Characteristics other: High socioeconomic status (SES)
Extracted molecule total RNA
Extraction protocol Peripheral blood leukocytes were isolated from fresh whole blood by ficol density gradient, CD2+ cells were isolated by MACS immunomagnetic positive selection, and total RNA was extracted using Qiagen RNEasy.
Label biotin
Label protocol Standard Affymetrix probe synthesis for gene expression profiling (carried out in UCLA DNA Microarray Core).
Hybridization protocol Standard Affymetrix hybridization protocol for gen expression profiling (carried out in UCLA DNA Microarray Core).
Scan protocol Standard Affymetrixscan protocol for gene expression profiling (carried out in UCLA DNA Microarray Core).
Description Affymetrix U133A
Data processing RMA (RMAExpress) processing of Affymetrix .CEL files generated by UCLA DNA Microarray Core.
Submission date May 24, 2007
Last update date Mar 29, 2010
Contact name Steve Cole
Organization name UCLA School of Medicine
Department Medicine
Street address 11-934 Factor Bldg, UCLA
City Los Angeles
State/province CA
ZIP/Postal code 90095-1678
Country USA
Platform ID GPL96
Series (1)
GSE7894 Differential gene expression in peripheral blood CD2+ leukocytes from PATH particpants

Data table header descriptions
VALUE Log2 metric RMA expression estimate.

Data table
205048_s_at 3.354133
202917_s_at 7.110382
221728_x_at 4.336148
220784_s_at 4.020367
209480_at 8.855761
214146_s_at 5.657019
214218_s_at 3.656828
209116_x_at 6.694825
200782_at 7.385345
201743_at 5.459153
211696_x_at 6.845222
202912_at 7.032595
214414_x_at 7.673604
202651_at 5.943025
217941_s_at 7.826390
206390_x_at 6.830078
202503_s_at 6.900150
202602_s_at 6.469372
215223_s_at 6.566294
217022_s_at 4.596298

Total number of rows: 22283

Table truncated, full table size 434 Kbytes.

Supplementary file Size Download File type/resource
GSM194194.CEL.gz 3.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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