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Sample GSM194191 Query DataSets for GSM194191
Status Public on May 26, 2009
Title HIghSES 2
Sample type RNA
Source name Peripheral blood CD2+ leukocytes
Organism Homo sapiens
Characteristics other: High socioeconomic status (SES)
Extracted molecule total RNA
Extraction protocol Peripheral blood leukocytes were isolated from fresh whole blood by ficol density gradient, CD2+ cells were isolated by MACS immunomagnetic positive selection, and total RNA was extracted using Qiagen RNEasy.
Label biotin
Label protocol Standard Affymetrix probe synthesis for gene expression profiling (carried out in UCLA DNA Microarray Core).
Hybridization protocol Standard Affymetrix hybridization protocol for gen expression profiling (carried out in UCLA DNA Microarray Core).
Scan protocol Standard Affymetrixscan protocol for gene expression profiling (carried out in UCLA DNA Microarray Core).
Description Affymetrix U133A
Data processing RMA (RMAExpress) processing of Affymetrix .CEL files generated by UCLA DNA Microarray Core.
Submission date May 24, 2007
Last update date Mar 29, 2010
Contact name Steve Cole
Organization name UCLA School of Medicine
Department Medicine
Street address 11-934 Factor Bldg, UCLA
City Los Angeles
State/province CA
ZIP/Postal code 90095-1678
Country USA
Platform ID GPL96
Series (1)
GSE7894 Differential gene expression in peripheral blood CD2+ leukocytes from PATH particpants

Data table header descriptions
VALUE Log2 metric RMA expression estimate.

Data table
205048_s_at 3.227169
202917_s_at 6.210481
221728_x_at 4.411155
220784_s_at 5.264038
209480_at 8.168125
214146_s_at 5.501361
214218_s_at 3.988023
209116_x_at 7.852425
200782_at 8.006220
201743_at 5.451629
211696_x_at 8.320657
202912_at 6.895016
214414_x_at 8.701644
202651_at 5.521932
217941_s_at 7.923032
206390_x_at 6.874488
202503_s_at 6.007609
202602_s_at 6.144277
215223_s_at 6.548824
217022_s_at 5.337345

Total number of rows: 22283

Table truncated, full table size 434 Kbytes.

Supplementary file Size Download File type/resource
GSM194191.CEL.gz 3.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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