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Sample GSM1938958 Query DataSets for GSM1938958
Status Public on Mar 16, 2016
Title pES10 d-G1
Sample type genomic
Source name Diploid pES10 cells in G1 (2c)
Organism Homo sapiens
Characteristics cell line: d-pES10
passage: 17
differentiation status: Undifferentiated
Extracted molecule genomic DNA
Extraction protocol Genomic DNA was isolated using the NucleoSpin Tissue Kit (MACHEREY-NAGEL)
Label Cy5 and Cy3
Label protocol Standard Illumina protocol
Hybridization protocol Standard Illumina protocol
Scan protocol BeadChips were scanned with Illumina's iScan System
Description 101070480024_R06C01
Data processing IDAT files were processed using Genome Studio Genotyping Module (Illumina)
GC Score, B Allele Frequency and Log R Ratio values obtained from Genome Studio Genotyping Module (Illumina)
Submission date Nov 12, 2015
Last update date Mar 16, 2016
Contact name Ido Sagi
Organization name The Hebrew University of Jerusalem
Department Genetics
Lab Nissim Benvenisty Lab, The Azrieli Center for Stem Cells and Genetic Research
Street address Givat Ram
City Jerusalem
ZIP/Postal code 91904
Country Israel
Platform ID GPL21135
Series (2)
GSE71458 Derivation and differentiation of haploid human embryonic stem cells
GSE74950 Derivation and differentiation of haploid human embryonic stem cells [SNP array]

Data table header descriptions
VALUE Log R Ratio

Data table
200610-1 -0.1073
200610-10 -0.1289
200610-100 -0.1291
200610-102 0.0253
200610-105 0.0361
200610-107 -0.4538
200610-108 -0.0867
200610-109 -0.0826
200610-110 0.0029
200610-111 -0.0786
200610-112 0.0394
200610-113 0.059
200610-114 -0.0678
200610-115 0.0405
200610-116 -0.5226
200610-117 0.0502
200610-118 0.115
200610-119 0.3059
200610-12 0.0401
200610-120 -0.0751

Total number of rows: 2583651

Table truncated, full table size 46559 Kbytes.

Supplementary file Size Download File type/resource
GSM1938958_101070480024_R06C01_Grn.idat.gz 17.5 Mb (ftp)(http) IDAT
GSM1938958_101070480024_R06C01_Red.idat.gz 17.8 Mb (ftp)(http) IDAT
Processed data included within Sample table
Processed data are available on Series record

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