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Sample GSM18434 Query DataSets for GSM18434
Status Public on Mar 24, 2004
Title PGA_PA-D_85
Sample type RNA
 
Source name Left Ventricle Biopsy
Organism Homo sapiens
Extracted molecule total RNA
 
Description To establish changes in cardiac transcription profiles brought about by heart failure we collected myocardial samples from patients undergoing cardiac transplantation whose failure arises from different etiologies (e.g. idiopathic dilated cardiomyopathy, ischemic cardiomyopathy, alcoholic cardiomyopathy, valvular cardiomyopathy, and hypertrophic cardiomyopathy) and from "normal" organ donors whose hearts cannot be used for transplants. The transcriptional profile of the mRNA in these samples will be measured with gene array technology. Changes in transcriptional profiles can be correlated with the physiologic profile of heart-failure hearts acquired at the time of transplantation.http://cardiogenomics.med.harvard.edu/project-detail?project_id=229
Keywords = human, idiopathic, ischemic, cardiac, hypertrophy
 
Submission date Mar 09, 2004
Last update date Aug 28, 2018
Contact name Martina Schinke
URL http://www.cardiogenomics.org
Organization name Harvard University
Department Bauer Center for Genomic Research
Lab Cardiogenomics
Street address 7 Divinity Ave
City Cambridge
State/province MA
ZIP/Postal code 02138
Country USA
 
Platform ID GPL570
Series (1)
GSE1145 changes in cardiac transcription profiles brought about by heart failure
Relations
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1150.5 P 0.001102
AFFX-BioB-M_at 1672.6 P 0.001248
AFFX-BioB-3_at 742.1 P 0.021902
AFFX-BioC-5_at 2475.6 P 0.000169
AFFX-BioC-3_at 2308.6 P 0.000044
AFFX-BioDn-5_at 3126.2 P 0.000081
AFFX-BioDn-3_at 17224.1 P 0.000169
AFFX-CreX-5_at 31662.5 P 0.000052
AFFX-CreX-3_at 31895.4 P 0.000044
AFFX-DapX-5_at 58.9 A 0.089478
AFFX-DapX-M_at 50.7 A 0.60308
AFFX-DapX-3_at 9.8 A 0.868639
AFFX-LysX-5_at 134.5 P 0.020022
AFFX-LysX-M_at 126.1 A 0.354453
AFFX-LysX-3_at 44.7 A 0.368438
AFFX-PheX-5_at 7.1 A 0.783476
AFFX-PheX-M_at 20.4 A 0.883887
AFFX-PheX-3_at 68.4 A 0.737173
AFFX-ThrX-5_at 34.3 A 0.617401
AFFX-ThrX-M_at 20.4 A 0.783476

Total number of rows: 54675

Table truncated, full table size 1454 Kbytes.




Supplementary file Size Download File type/resource
GSM18434_PA-D_85.cel.gz 8.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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