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GEO accession:
Sample GSM180533
Query DataSets for GSM180533
Status
Public on Dec 09, 2008
Title
TconvThy, rep2
Sample type
RNA
Source name
Tconv cells isolated from the thymus
Organism
Mus musculus
Characteristics
Genetic background: BDC2.5/NOD
Age: 4-6 wks
Number of mice per chip: 3-6
Tissue: Thymus
Sort: (pre-sort depletion of CD8a by MACS) B220-, CD11b-, CD8a-, CD4+, CD25-
Extracted molecule
total RNA
Extraction protocol
RNA isolated with Trizol reagent and amplified twice with the MessageAmp aRNA Kit (Ambion)
Label
Biotin
Label protocol
BioArray High Yield RNA Transcript Labeling T7 Kit (Enzo Life Sciences)
Hybridization protocol
Per Joslin Diabetes Center microarray core facility.
Scan protocol
Per Joslin Diabetes Center microarray core facility.
Description
jos3366.CEL
Data processing
RMA
Submission date
Apr 04, 2007
Last update date
Aug 28, 2018
Contact name
CBDM Lab
E-mail(s)
cbdm@hms.harvard.edu
Phone
617-432-7747
Organization name
Harvard Medical School
Department
Microbiology and Immunobiology
Lab
CBDM
Street address
77 Avenue Louis Pasteur
City
Boston
State/province
MA
ZIP/Postal code
02215
Country
USA
Platform ID
GPL1261
Series (2)
GSE7460
Contribution of Foxp3 to the Treg signature
GSE7852
Fat Treg cells
Relations
Reanalyzed by
GSE119085
Data table header descriptions
ID_REF
VALUE
RMA-unlogged
Data table
ID_REF
VALUE
1415670_at
138.1065338
1415671_at
428.8911187
1415672_at
3363.067539
1415673_at
224.9932088
1415674_a_at
314.9841506
1415675_at
331.6374197
1415676_a_at
1495.638634
1415677_at
108.6603764
1415678_at
836.7453667
1415679_at
3292.249459
1415680_at
257.101834
1415681_at
261.8656701
1415682_at
170.0516576
1415683_at
1015.002771
1415684_at
163.5171521
1415685_at
101.8640113
1415686_at
1294.221662
1415687_a_at
1689.158358
1415688_at
1854.698179
1415689_s_at
451.3146723
Total number of rows:
45101
Table truncated, full table size
1026 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM180533.CEL.gz
3.5 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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