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GEO help: Mouse over screen elements for information. |
|
| Status |
Public on Dec 04, 2007 |
| Title |
ActCD8TGF, rep1 |
| Sample type |
RNA |
| |
|
| Source name |
CD8 T cells activated in vitro with TGFbeta
|
| Organism |
Mus musculus |
| Characteristics |
Genetic background: BDC2.5/NOD
Age: 4-6 wks
Number of mice per chip: 3-6
Tissue: Spleen and LN (cervical, mesenteric)
Sort: B220-, CD11b-, CD4-, CD69-, CD25-, CD62Lhi, CD8a+
Culture: Activation in vitro with anti-CD3/-CD28 beads + IL2 (20 U/ml) + TGFbeta (25 ng/ml) for 4 days
Post-culture sort: CD8a hi expressers
|
| Extracted molecule |
total RNA |
| Extraction protocol |
RNA isolated with Trizol reagent and amplified twice with the MessageAmp aRNA Kit (Ambion)
|
| Label |
Biotin
|
| Label protocol |
BioArray High Yield RNA Transcript Labeling T7 Kit (Enzo Life Sciences)
|
| |
|
| Hybridization protocol |
Per Joslin Diabetes Center microarray core facility.
|
| Scan protocol |
Per Joslin Diabetes Center microarray core facility.
|
| Description |
jos3284.CEL
|
| Data processing |
RMA
|
| |
|
| Submission date |
Mar 22, 2007 |
| Last update date |
Aug 28, 2018 |
| Contact name |
CBDM Lab |
| E-mail(s) |
cbdm@hms.harvard.edu
|
| Phone |
617-432-7747
|
| Organization name |
Harvard Medical School
|
| Department |
Microbiology and Immunobiology
|
| Lab |
CBDM
|
| Street address |
77 Avenue Louis Pasteur
|
| City |
Boston |
| State/province |
MA |
| ZIP/Postal code |
02215 |
| Country |
USA |
| |
|
| Platform ID |
GPL1261 |
| Series (1) |
| GSE7460 |
Contribution of Foxp3 to the Treg signature |
|
| Relations |
| Reanalyzed by |
GSE119085 |
| Data table header descriptions |
| ID_REF |
|
| VALUE |
RMA-unlogged |
| Data table |
| ID_REF |
VALUE |
| 1415670_at |
181.3917674 |
| 1415671_at |
681.5385941 |
| 1415672_at |
3907.832636 |
| 1415673_at |
284.1273414 |
| 1415674_a_at |
299.1036401 |
| 1415675_at |
401.2583153 |
| 1415676_a_at |
698.3028664 |
| 1415677_at |
374.9623636 |
| 1415678_at |
847.1988379 |
| 1415679_at |
2529.215354 |
| 1415680_at |
272.2025462 |
| 1415681_at |
257.2045031 |
| 1415682_at |
150.0314379 |
| 1415683_at |
935.5818223 |
| 1415684_at |
378.6058289 |
| 1415685_at |
150.4531869 |
| 1415686_at |
1295.439267 |
| 1415687_a_at |
1929.592045 |
| 1415688_at |
1584.27135 |
| 1415689_s_at |
675.0712057 |
Total number of rows: 45101
Table truncated, full table size 1026 Kbytes.
| Supplementary file |
Size |
Download |
File type/resource |
| GSM176881.CEL.gz |
3.1 Mb |
(ftp)(http) |
CEL |
| Processed data included within Sample table |
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