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Sample GSM1630215 Query DataSets for GSM1630215
Status Public on Jun 01, 2015
Title Low-fat diet 8615616005_F
Sample type RNA
 
Source name liver
Organism Mus musculus
Characteristics treatment: low-fat diet (10E%) during 13 weeks.
age: 20 weeks
tissue: liver
strain: C57BL/6J
Extracted molecule total RNA
Extraction protocol AllPrep DNA/RNA mini Kit, Quiagen Cat.No:80104
Label biotin
Label protocol Illumina®Totalprep-96RNA Amplification kit 4397949 RevC, (Modification of Amplification kit v 2.2)
 
Hybridization protocol WGGEX_Direct_Hybridization_Assay_EUC_11322187_A
Scan protocol Standard Illumina iScan N240 scanning protocol
Direct Hyb scanning file
Description 8615616005_F
Data processing The data were normalised using quantile normalisation with BASE
 
Submission date Mar 09, 2015
Last update date Jun 01, 2015
Contact name Petter Storm
E-mail(s) petter.storm@med.lu.se
Phone +46-40 39 12 27
Organization name Lund University
Department Developmental and Regenerative Neurobiology
Street address Sölvegatan 19, BMC A11
City Lund
ZIP/Postal code 22184
Country Sweden
 
Platform ID GPL6887
Series (1)
GSE66711 Expression data from livers from mice receiving high-fat (HF) diets supplemented with different berries

Data table header descriptions
ID_REF
VALUE Quantile normalized
8615616005_F _detection_P-value

Data table
ID_REF VALUE 8615616005_F _detection_P-value
ILMN_2417611 8.564462518 0
ILMN_2762289 4.318864619 0.4604701
ILMN_2896528 10.73558147 0
ILMN_2721178 8.424708267 0
ILMN_2458837 4.204771227 0.917735
ILMN_3033922 8.928288436 0
ILMN_3092673 11.42214992 0
ILMN_1230777 11.01965276 0
ILMN_1246069 10.60176905 0
ILMN_1232042 4.189511694 0.9540598
ILMN_1243193 8.553753285 0
ILMN_2524361 4.262490158 0.6869658
ILMN_1242440 4.363742794 0.3194444
ILMN_1233188 4.402105606 0.2361111
ILMN_2543688 6.52945095 0
ILMN_1259789 4.507463936 0.1303419
ILMN_2816356 4.306426311 0.5202991
ILMN_1224596 4.407637447 0.2286325
ILMN_1233643 4.621516284 0.0673077
ILMN_2808939 9.361142512 0

Total number of rows: 45281

Table truncated, full table size 1468 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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