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Sample GSM1630205 Query DataSets for GSM1630205
Status Public on Jun 01, 2015
Title High-fat diet 8615616040_E
Sample type RNA
 
Source name liver
Organism Mus musculus
Characteristics treatment: high-fat diet (45E%) during 13 weeks.
age: 20 weeks
tissue: liver
strain: C57BL/6J
Extracted molecule total RNA
Extraction protocol AllPrep DNA/RNA mini Kit, Quiagen Cat.No:80104
Label biotin
Label protocol Illumina®Totalprep-96RNA Amplification kit 4397949 RevC, (Modification of Amplification kit v 2.2)
 
Hybridization protocol WGGEX_Direct_Hybridization_Assay_EUC_11322187_A
Scan protocol Standard Illumina iScan N240 scanning protocol
Direct Hyb scanning file
Description 8615616040_E
Data processing The data were normalised using quantile normalisation with BASE
 
Submission date Mar 09, 2015
Last update date Jun 01, 2015
Contact name Petter Storm
E-mail(s) petter.storm@med.lu.se
Phone +46-40 39 12 27
Organization name Lund University
Department Developmental and Regenerative Neurobiology
Street address Sölvegatan 19, BMC A11
City Lund
ZIP/Postal code 22184
Country Sweden
 
Platform ID GPL6887
Series (1)
GSE66711 Expression data from livers from mice receiving high-fat (HF) diets supplemented with different berries

Data table header descriptions
ID_REF
VALUE Quantile normalized
8615616040_E _detection_P-value

Data table
ID_REF VALUE 8615616040_E _detection_P-value
ILMN_2417611 8.623847735 0
ILMN_2762289 4.287824699 0.5950854
ILMN_2896528 10.64817681 0
ILMN_2721178 8.535462368 0
ILMN_2458837 4.295002472 0.5673077
ILMN_3033922 8.706650852 0
ILMN_3092673 11.63103575 0
ILMN_1230777 11.14730807 0
ILMN_1246069 10.3656942 0
ILMN_1232042 4.218163458 0.8760684
ILMN_1243193 8.732178443 0
ILMN_2524361 4.241868576 0.7724359
ILMN_1242440 4.30107834 0.5405983
ILMN_1233188 4.621077038 0.05235043
ILMN_2543688 7.282749012 0
ILMN_1259789 4.393734307 0.2660256
ILMN_2816356 4.403432885 0.25
ILMN_1224596 4.333091231 0.4134615
ILMN_1233643 4.46128364 0.1645299
ILMN_2808939 9.463904161 0

Total number of rows: 45281

Table truncated, full table size 1468 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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