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Sample GSM1630201 Query DataSets for GSM1630201
Status Public on Jun 01, 2015
Title High-fat diet + Bilberry 8795266008_D
Sample type RNA
 
Source name liver
Organism Mus musculus
Characteristics treatment: high-fat diet (45E%) supplemented with 20% bilberries during 13 weeks.
age: 20 weeks
tissue: liver
strain: C57BL/6J
Extracted molecule total RNA
Extraction protocol AllPrep DNA/RNA mini Kit, Quiagen Cat.No:80104
Label biotin
Label protocol Illumina®Totalprep-96RNA Amplification kit 4397949 RevC, (Modification of Amplification kit v 2.2)
 
Hybridization protocol WGGEX_Direct_Hybridization_Assay_EUC_11322187_A
Scan protocol Standard Illumina iScan N240 scanning protocol
Direct Hyb scanning file
Description 8795266008_D
Data processing The data were normalised using quantile normalisation with BASE
 
Submission date Mar 09, 2015
Last update date Jun 01, 2015
Contact name Petter Storm
E-mail(s) petter.storm@med.lu.se
Phone +46-40 39 12 27
Organization name Lund University
Department Developmental and Regenerative Neurobiology
Street address Sölvegatan 19, BMC A11
City Lund
ZIP/Postal code 22184
Country Sweden
 
Platform ID GPL6887
Series (1)
GSE66711 Expression data from livers from mice receiving high-fat (HF) diets supplemented with different berries

Data table header descriptions
ID_REF
VALUE Quantile normalized
8795266008_D _detection_P-value

Data table
ID_REF VALUE 8795266008_D _detection_P-value
ILMN_2417611 9.012640647 0
ILMN_2762289 4.220385708 0.875
ILMN_2896528 10.73558147 0
ILMN_2721178 8.218870378 0
ILMN_2458837 4.221659098 0.8707265
ILMN_3033922 9.062154251 0
ILMN_3092673 11.63103575 0
ILMN_1230777 11.03691617 0
ILMN_1246069 10.35179731 0
ILMN_1232042 4.156301641 1
ILMN_1243193 8.658105956 0
ILMN_2524361 4.251298942 0.7435898
ILMN_1242440 4.329376882 0.4273504
ILMN_1233188 4.558110952 0.1014957
ILMN_2543688 5.784486253 0
ILMN_1259789 4.36340834 0.3344017
ILMN_2816356 4.336459444 0.4049145
ILMN_1224596 4.496690434 0.1356838
ILMN_1233643 4.33390787 0.4166667
ILMN_2808939 10.00487617 0

Total number of rows: 45281

Table truncated, full table size 1464 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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