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Sample GSM1630200 Query DataSets for GSM1630200
Status Public on Jun 01, 2015
Title High-fat diet + Bilberry 8615616083_D
Sample type RNA
 
Source name liver
Organism Mus musculus
Characteristics treatment: high-fat diet (45E%) supplemented with 20% bilberries during 13 weeks.
age: 20 weeks
tissue: liver
strain: C57BL/6J
Extracted molecule total RNA
Extraction protocol AllPrep DNA/RNA mini Kit, Quiagen Cat.No:80104
Label biotin
Label protocol Illumina®Totalprep-96RNA Amplification kit 4397949 RevC, (Modification of Amplification kit v 2.2)
 
Hybridization protocol WGGEX_Direct_Hybridization_Assay_EUC_11322187_A
Scan protocol Standard Illumina iScan N240 scanning protocol
Direct Hyb scanning file
Description 8615616083_D
Data processing The data were normalised using quantile normalisation with BASE
 
Submission date Mar 09, 2015
Last update date Jun 01, 2015
Contact name Petter Storm
E-mail(s) petter.storm@med.lu.se
Phone +46-40 39 12 27
Organization name Lund University
Department Developmental and Regenerative Neurobiology
Street address Sölvegatan 19, BMC A11
City Lund
ZIP/Postal code 22184
Country Sweden
 
Platform ID GPL6887
Series (1)
GSE66711 Expression data from livers from mice receiving high-fat (HF) diets supplemented with different berries

Data table header descriptions
ID_REF
VALUE Quantile normalized
8615616083_D _detection_P-value

Data table
ID_REF VALUE 8615616083_D _detection_P-value
ILMN_2417611 8.691308165 0
ILMN_2762289 4.241940075 0.7767094
ILMN_2896528 10.9512212 0
ILMN_2721178 8.298959649 0
ILMN_2458837 4.218671076 0.8867521
ILMN_3033922 8.614359434 0
ILMN_3092673 11.72284652 0
ILMN_1230777 11.09418712 0
ILMN_1246069 10.36299894 0
ILMN_1232042 4.233959246 0.8119658
ILMN_1243193 8.60021103 0
ILMN_2524361 4.441903407 0.2094017
ILMN_1242440 4.28611671 0.5833333
ILMN_1233188 4.779039461 0.03311966
ILMN_2543688 6.459067808 0
ILMN_1259789 4.667711234 0.05769231
ILMN_2816356 4.39835994 0.2713675
ILMN_1224596 4.85681768 0.01709402
ILMN_1233643 4.722571366 0.04273504
ILMN_2808939 9.536549919 0

Total number of rows: 45281

Table truncated, full table size 1453 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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