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Sample GSM1630180 Query DataSets for GSM1630180
Status Public on Jun 01, 2015
Title High-fat diet + Lingonberry 8784129094_A
Sample type RNA
 
Source name liver
Organism Mus musculus
Characteristics treatment: high-fat diet (45E%) supplemented with 20% lingonberries during 13 weeks.
age: 20 weeks
tissue: liver
strain: C57BL/6J
Extracted molecule total RNA
Extraction protocol AllPrep DNA/RNA mini Kit, Quiagen Cat.No:80104
Label biotin
Label protocol Illumina®Totalprep-96RNA Amplification kit 4397949 RevC, (Modification of Amplification kit v 2.2)
 
Hybridization protocol WGGEX_Direct_Hybridization_Assay_EUC_11322187_A
Scan protocol Standard Illumina iScan N240 scanning protocol
Direct Hyb scanning file
Description 8784129094_A
Data processing The data were normalised using quantile normalisation with BASE
 
Submission date Mar 09, 2015
Last update date Jun 01, 2015
Contact name Petter Storm
E-mail(s) petter.storm@med.lu.se
Phone +46-40 39 12 27
Organization name Lund University
Department Developmental and Regenerative Neurobiology
Street address Sölvegatan 19, BMC A11
City Lund
ZIP/Postal code 22184
Country Sweden
 
Platform ID GPL6887
Series (1)
GSE66711 Expression data from livers from mice receiving high-fat (HF) diets supplemented with different berries

Data table header descriptions
ID_REF
VALUE Quantile normalized
8784129094_A _detection_P-value

Data table
ID_REF VALUE 8784129094_A _detection_P-value
ILMN_2417611 8.386387198 0
ILMN_2762289 4.245474272 0.7532051
ILMN_2896528 10.37608524 0
ILMN_2721178 7.927756915 0
ILMN_2458837 4.287630631 0.5608974
ILMN_3033922 8.331351353 0
ILMN_3092673 11.52654554 0
ILMN_1230777 10.87934518 0
ILMN_1246069 10.15263366 0
ILMN_1232042 4.216295054 0.8739316
ILMN_1243193 8.873269491 0
ILMN_2524361 4.29555905 0.534188
ILMN_1242440 4.33363933 0.3963675
ILMN_1233188 4.378440951 0.2809829
ILMN_2543688 5.520613151 0
ILMN_1259789 4.309391521 0.4786325
ILMN_2816356 4.626712334 0.05876068
ILMN_1224596 4.860168733 0.01388889
ILMN_1233643 4.79772249 0.02029915
ILMN_2808939 9.417273142 0

Total number of rows: 45281

Table truncated, full table size 1456 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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